RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 CDC45O75419 566 aa18.48■□□□□ 0.55
PXN-208ENST00000538144 GLRX3O76003 335 aaKnown RBP18.48■□□□□ 0.55
PXN-208ENST00000538144 IGHMBP2P38935 993 aaKnown RBP18.48■□□□□ 0.55
PXN-208ENST00000538144 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
PXN-208ENST00000538144 COL4A1P02462 1669 aa18.47■□□□□ 0.55
PXN-208ENST00000538144 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
PXN-208ENST00000538144 A0A1B0GUL7 405 aa18.47■□□□□ 0.55
PXN-208ENST00000538144 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
PXN-208ENST00000538144 CDC5LQ99459 802 aaKnown RBP18.47■□□□□ 0.55
PXN-208ENST00000538144 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
PXN-208ENST00000538144 ZNF609O15014 1411 aa18.47■□□□□ 0.55
PXN-208ENST00000538144 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
PXN-208ENST00000538144 LRP5O75197 1615 aa18.46■□□□□ 0.55
PXN-208ENST00000538144 ST5P78524 1137 aa18.45■□□□□ 0.54
PXN-208ENST00000538144 MSL1Q68DK7 614 aa18.45■□□□□ 0.54
PXN-208ENST00000538144 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
PXN-208ENST00000538144 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
PXN-208ENST00000538144 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
PXN-208ENST00000538144 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
PXN-208ENST00000538144 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
PXN-208ENST00000538144 VGLL2Q8N8G2 317 aa18.44■□□□□ 0.54
PXN-208ENST00000538144 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
PXN-208ENST00000538144 PDE8BO95263 885 aa18.44■□□□□ 0.54
PXN-208ENST00000538144 TAF5LO75529 589 aa18.43■□□□□ 0.54
PXN-208ENST00000538144 ADORA1P30542 326 aa18.43■□□□□ 0.54
PXN-208ENST00000538144 ATP2B3Q16720 1220 aa18.43■□□□□ 0.54
PXN-208ENST00000538144 CCDC125Q86Z20 511 aa18.43■□□□□ 0.54
PXN-208ENST00000538144 CNTROBQ8N137 903 aa18.43■□□□□ 0.54
PXN-208ENST00000538144 QSER1Q2KHR3 1735 aa18.43■□□□□ 0.54
PXN-208ENST00000538144 MMP10P09238 476 aa18.42■□□□□ 0.54
PXN-208ENST00000538144 ATP5JP18859 108 aa18.42■□□□□ 0.54
PXN-208ENST00000538144 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
PXN-208ENST00000538144 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
PXN-208ENST00000538144 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
PXN-208ENST00000538144 BSDC1Q9NW68 430 aaPredicted RBP18.42■□□□□ 0.54
PXN-208ENST00000538144 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
PXN-208ENST00000538144 CHRNDQ07001 517 aa18.41■□□□□ 0.54
PXN-208ENST00000538144 GORABQ5T7V8 394 aa18.41■□□□□ 0.54
PXN-208ENST00000538144 UPF2Q9HAU5 1272 aaKnown RBP18.41■□□□□ 0.54
PXN-208ENST00000538144 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
PXN-208ENST00000538144 SNAP23O00161 211 aa18.4■□□□□ 0.54
PXN-208ENST00000538144 CHMLP26374 656 aa18.39■□□□□ 0.54
PXN-208ENST00000538144 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.54
PXN-208ENST00000538144 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.54
PXN-208ENST00000538144 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.54
PXN-208ENST00000538144 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.54
PXN-208ENST00000538144 NRXN2Q9P2S2 1712 aa18.39■□□□□ 0.54
PXN-208ENST00000538144 LPIN2Q92539 896 aa18.39■□□□□ 0.53
PXN-208ENST00000538144 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
PXN-208ENST00000538144 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
PXN-208ENST00000538144 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
PXN-208ENST00000538144 A0A1B0GUL6 1792 aa18.39■□□□□ 0.53
PXN-208ENST00000538144 ANKRD31Q8N7Z5 1873 aa18.39■□□□□ 0.53
PXN-208ENST00000538144 FGFR2P21802 821 aa18.38■□□□□ 0.53
PXN-208ENST00000538144 TTC39AQ5SRH9 613 aa18.38■□□□□ 0.53
PXN-208ENST00000538144 EDC3Q96F86 508 aaKnown RBP18.38■□□□□ 0.53
PXN-208ENST00000538144 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
PXN-208ENST00000538144 CRY2Q49AN0 593 aa18.37■□□□□ 0.53
PXN-208ENST00000538144 HAUS7Q99871 368 aa18.37■□□□□ 0.53
PXN-208ENST00000538144 IFIT1P09914 478 aaKnown RBP18.37■□□□□ 0.53
PXN-208ENST00000538144 SLC5A1P13866 664 aa18.37■□□□□ 0.53
PXN-208ENST00000538144 GRAPQ13588 217 aa18.36■□□□□ 0.53
PXN-208ENST00000538144 GRAPLQ8TC17 118 aaPredicted RBP18.36■□□□□ 0.53
PXN-208ENST00000538144 ARAP2Q8WZ64 1704 aa18.36■□□□□ 0.53
PXN-208ENST00000538144 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
PXN-208ENST00000538144 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
PXN-208ENST00000538144 C22orf23Q9BZE7 217 aa18.35■□□□□ 0.53
PXN-208ENST00000538144 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
PXN-208ENST00000538144 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
PXN-208ENST00000538144 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
PXN-208ENST00000538144 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
PXN-208ENST00000538144 FSD1Q9BTV5 496 aa18.35■□□□□ 0.53
PXN-208ENST00000538144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
PXN-208ENST00000538144 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
PXN-208ENST00000538144 GOLIM4O00461 696 aa18.33■□□□□ 0.53
PXN-208ENST00000538144 PHKA1P46020 1223 aa18.33■□□□□ 0.53
PXN-208ENST00000538144 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.53
PXN-208ENST00000538144 SCARF1Q14162 830 aa18.33■□□□□ 0.53
PXN-208ENST00000538144 CCDC102BQ68D86 513 aa18.33■□□□□ 0.53
PXN-208ENST00000538144 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.53
PXN-208ENST00000538144 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.53
PXN-208ENST00000538144 EIF5BO60841 1220 aaKnown RBP18.33■□□□□ 0.52
PXN-208ENST00000538144 CWC27Q6UX04 472 aaKnown RBP18.33■□□□□ 0.52
PXN-208ENST00000538144 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
PXN-208ENST00000538144 AKAP11Q9UKA4 1901 aa18.32■□□□□ 0.52
PXN-208ENST00000538144 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
PXN-208ENST00000538144 PDE6BP35913 854 aa18.32■□□□□ 0.52
PXN-208ENST00000538144 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
PXN-208ENST00000538144 UPF1Q92900 1129 aaKnown RBP eCLIP18.32■□□□□ 0.52
PXN-208ENST00000538144 ANKRD2Q9GZV1 360 aa18.32■□□□□ 0.52
PXN-208ENST00000538144 IL25Q9H293 177 aa18.32■□□□□ 0.52
PXN-208ENST00000538144 MCAMP43121 646 aa18.31■□□□□ 0.52
PXN-208ENST00000538144 BCAMP50895 628 aa18.31■□□□□ 0.52
PXN-208ENST00000538144 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
PXN-208ENST00000538144 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
PXN-208ENST00000538144 ANTXR1Q9H6X2 564 aa18.31■□□□□ 0.52
PXN-208ENST00000538144 REC8O95072 547 aa18.3■□□□□ 0.52
PXN-208ENST00000538144 ZAP70P43403 619 aa18.3■□□□□ 0.52
PXN-208ENST00000538144 KCNJ4P48050 445 aa18.3■□□□□ 0.52
PXN-208ENST00000538144 ZNF512BQ96KM6 892 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms