RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 ABL2P42684 1182 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 RNF20Q5VTR2 975 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 MARCH10Q8NA82 808 aaPredicted RBP7.93□□□□□ -1.14
DDB1-210ENST00000538129 PRKRIP1Q9H875 184 aaPredicted RBP7.93□□□□□ -1.14
DDB1-210ENST00000538129 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 TBC1D2BQ9UPU7 963 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 NUDCQ9Y266 331 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 TLL2Q9Y6L7 1015 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 WNK3Q9BYP7 1800 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 PLEKHG2Q9H7P9 1386 aa7.93□□□□□ -1.14
DDB1-210ENST00000538129 J3QL48 77 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 SMPD1P17405 629 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 SOX11P35716 441 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 AMOTQ4VCS5 1084 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 FAM182BQ5T319 152 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 SULT6B1Q6IMI4 303 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 TRAF7Q6Q0C0 670 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 DDX54Q8TDD1 881 aaKnown RBP7.92□□□□□ -1.14
DDB1-210ENST00000538129 SPG7Q9UQ90 795 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 OVOS2A0A0G2JMS6 1433 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 BCL9O00512 1426 aa7.92□□□□□ -1.14
DDB1-210ENST00000538129 AXIN1O15169 862 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 AVPP01185 164 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 FBXO45P0C2W1 286 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 NNTQ13423 1086 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 PLEKHO1Q53GL0 409 aaPredicted RBP7.91□□□□□ -1.14
DDB1-210ENST00000538129 KCTD15Q96SI1 283 aaPredicted RBP7.91□□□□□ -1.14
DDB1-210ENST00000538129 MYBBP1AQ9BQG0 1328 aaKnown RBP7.91□□□□□ -1.14
DDB1-210ENST00000538129 KDRP35968 1356 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 TNS2Q63HR2 1409 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 LRRC37A3O60309 1634 aa7.91□□□□□ -1.14
DDB1-210ENST00000538129 MEGF6O75095 1541 aa7.9□□□□□ -1.14
DDB1-210ENST00000538129 COL3A1P02461 1466 aaPredicted RBP7.9□□□□□ -1.14
DDB1-210ENST00000538129 PCDH11XQ9BZA7 1347 aa7.9□□□□□ -1.14
DDB1-210ENST00000538129 PCDH11YQ9BZA8 1340 aa7.9□□□□□ -1.14
DDB1-210ENST00000538129 U2SURPO15042 1029 aaKnown RBP7.9□□□□□ -1.14
DDB1-210ENST00000538129 SF3B2Q13435 895 aaKnown RBP7.9□□□□□ -1.14
DDB1-210ENST00000538129 AEBP1Q8IUX7 1158 aa7.9□□□□□ -1.14
DDB1-210ENST00000538129 ARID3AQ99856 593 aa7.9□□□□□ -1.14
DDB1-210ENST00000538129 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.14
DDB1-210ENST00000538129 RGPD1P0DJD0 1748 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 CYP27B1O15528 508 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 ANP32CO43423 234 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 TRIM37O94972 964 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 HMOX1P09601 288 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 U2AF1L5P0DN76 240 aaPredicted RBP7.89□□□□□ -1.15
DDB1-210ENST00000538129 FSHRP23945 695 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
DDB1-210ENST00000538129 U2AF1Q01081 240 aaKnown RBP eCLIP7.89□□□□□ -1.153e-7■□□□□ 8
DDB1-210ENST00000538129 SEMA3FQ13275 785 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 CCDC116Q8IYX3 515 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 IFNL2Q8IZJ0 200 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 PNNQ9H307 717 aaKnown RBP7.89□□□□□ -1.15
DDB1-210ENST00000538129 COG6Q9Y2V7 657 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
DDB1-210ENST00000538129 HSP90AB1P08238 724 aaKnown RBP7.88□□□□□ -1.15
DDB1-210ENST00000538129 PHKG2P15735 406 aa7.88□□□□□ -1.15
DDB1-210ENST00000538129 CRIPAKQ8N1N5 446 aa7.88□□□□□ -1.15
DDB1-210ENST00000538129 PKD1L3Q7Z443 1732 aa7.87□□□□□ -1.15
DDB1-210ENST00000538129 PLSCR1O15162 318 aa7.87□□□□□ -1.15
DDB1-210ENST00000538129 CAPN5O15484 640 aaPredicted RBP7.87□□□□□ -1.15
DDB1-210ENST00000538129 UPP2O95045 317 aa7.87□□□□□ -1.15
DDB1-210ENST00000538129 APBA3O96018 575 aa7.87□□□□□ -1.15
DDB1-210ENST00000538129 GRM5P41594 1212 aa7.87□□□□□ -1.15
DDB1-210ENST00000538129 BAG6P46379 1132 aa7.87□□□□□ -1.15
DDB1-210ENST00000538129 SHANK3Q9BYB0 1731 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 ERVV-2B6SEH9 535 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 KCNQ2O43526 872 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 PRKAR2BP31323 418 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
DDB1-210ENST00000538129 MTHFSDQ2M296 383 aaKnown RBP7.86□□□□□ -1.15
DDB1-210ENST00000538129 AKAP4Q5JQC9 854 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 ZNF530Q6P9A1 599 aaPredicted RBP7.86□□□□□ -1.15
DDB1-210ENST00000538129 HPS1Q92902 700 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 ACSBG1Q96GR2 724 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 DCAF5Q96JK2 942 aa7.86□□□□□ -1.15
DDB1-210ENST00000538129 NEFMP07197 916 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 PTF1AQ7RTS3 328 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 DEFB132Q7Z7B7 95 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 GAS2L2Q8NHY3 880 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 PHACTR3Q96KR7 559 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 CAMKK2Q96RR4 588 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
DDB1-210ENST00000538129 A6NJR5 290 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 GNAT3A8MTJ3 354 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 ZIC2O95409 532 aaPredicted RBP7.84□□□□□ -1.15
DDB1-210ENST00000538129 VAC14Q08AM6 782 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 SCARF1Q14162 830 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 WDR43Q15061 677 aaKnown RBP eCLIP7.84□□□□□ -1.15
DDB1-210ENST00000538129 SLFNL1Q499Z3 407 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 SYTL4Q96C24 671 aaPredicted RBP7.84□□□□□ -1.15
DDB1-210ENST00000538129 PLEKHF1Q96S99 279 aa7.84□□□□□ -1.15
DDB1-210ENST00000538129 NHSQ6T4R5 1651 aa7.83□□□□□ -1.16
DDB1-210ENST00000538129 HTATSF1O43719 755 aaKnown RBP7.83□□□□□ -1.16
DDB1-210ENST00000538129 HMGB2P26583 209 aaKnown RBP7.83□□□□□ -1.16
DDB1-210ENST00000538129 CABP4P57796 275 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms