RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 ZNF646O15015 1829 aaPredicted RBP19.05■□□□□ 0.64
LRRK1-211ENST00000538064 THSD7BQ9C0I4 1608 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 H7C1W4 665 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 RIMBP2O15034 1052 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 ECE2O60344 883 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 UFL1O94874 794 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 GCKRQ14397 625 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 UBE3BQ7Z3V4 1068 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 TTLL11Q8NHH1 800 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 CDC5LQ99459 802 aaKnown RBP19.05■□□□□ 0.64
LRRK1-211ENST00000538064 BCL2L13Q9BXK5 485 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 MKRN1Q9UHC7 482 aaKnown RBP19.05■□□□□ 0.64
LRRK1-211ENST00000538064 GGA1Q9UJY5 639 aa19.05■□□□□ 0.64
LRRK1-211ENST00000538064 XDHP47989 1333 aa19.04■□□□□ 0.64
LRRK1-211ENST00000538064 ZNF609O15014 1411 aa19.04■□□□□ 0.64
LRRK1-211ENST00000538064 LINS1Q8NG48 757 aa19.04■□□□□ 0.64
LRRK1-211ENST00000538064 GPR101Q96P66 508 aaPredicted RBP19.04■□□□□ 0.64
LRRK1-211ENST00000538064 PLA2G12BQ9BX93 195 aa19.04■□□□□ 0.64
LRRK1-211ENST00000538064 PSMD14O00487 310 aa19.03■□□□□ 0.64
LRRK1-211ENST00000538064 GREM2Q9H772 168 aa19.03■□□□□ 0.64
LRRK1-211ENST00000538064 CASP7P55210 303 aa19.02■□□□□ 0.64
LRRK1-211ENST00000538064 DPF2Q92785 391 aa19.02■□□□□ 0.64
LRRK1-211ENST00000538064 ZC3H12CQ9C0D7 883 aaKnown RBP19.02■□□□□ 0.64
LRRK1-211ENST00000538064 HSPA1AP0DMV8 641 aaKnown RBP19.01■□□□□ 0.63
LRRK1-211ENST00000538064 HSPA1BP0DMV9 641 aaKnown RBP19.01■□□□□ 0.63
LRRK1-211ENST00000538064 RPS12P25398 132 aaKnown RBP19.01■□□□□ 0.63
LRRK1-211ENST00000538064 DOK7Q18PE1 504 aa19.01■□□□□ 0.63
LRRK1-211ENST00000538064 MICALL2Q8IY33 904 aa19.01■□□□□ 0.63
LRRK1-211ENST00000538064 TRPM4Q8TD43 1214 aa19.01■□□□□ 0.63
LRRK1-211ENST00000538064 BSDC1Q9NW68 430 aaPredicted RBP19.01■□□□□ 0.63
LRRK1-211ENST00000538064 RASSF10A6NK89 507 aa19■□□□□ 0.63
LRRK1-211ENST00000538064 ATP2B4P23634 1241 aa19■□□□□ 0.63
LRRK1-211ENST00000538064 IFFO2Q5TF58 517 aa19■□□□□ 0.63
LRRK1-211ENST00000538064 ZC3H15Q8WU90 426 aaKnown RBP19■□□□□ 0.63
LRRK1-211ENST00000538064 PGAP2Q9UHJ9 254 aa19■□□□□ 0.63
LRRK1-211ENST00000538064 CNOT7Q9UIV1 285 aaKnown RBP19■□□□□ 0.63
LRRK1-211ENST00000538064 ZBTB12Q9Y330 459 aaPredicted RBP19■□□□□ 0.63
LRRK1-211ENST00000538064 MED23Q9ULK4 1368 aa19■□□□□ 0.63
LRRK1-211ENST00000538064 POLR2AP24928 1970 aaKnown RBP19■□□□□ 0.63
LRRK1-211ENST00000538064 SHTN1A0MZ66 631 aa18.99■□□□□ 0.63
LRRK1-211ENST00000538064 H7C1D1 291 aa18.99■□□□□ 0.63
LRRK1-211ENST00000538064 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
LRRK1-211ENST00000538064 HIRAP54198 1017 aaPredicted RBP18.99■□□□□ 0.63
LRRK1-211ENST00000538064 F6X3S4 739 aa18.98■□□□□ 0.63
LRRK1-211ENST00000538064 TRAF5O00463 557 aa18.98■□□□□ 0.63
LRRK1-211ENST00000538064 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
LRRK1-211ENST00000538064 BEND3Q5T5X7 828 aa18.98■□□□□ 0.63
LRRK1-211ENST00000538064 KCNQ5Q9NR82 932 aa18.98■□□□□ 0.63
LRRK1-211ENST00000538064 MINPP1Q9UNW1 487 aa18.98■□□□□ 0.63
LRRK1-211ENST00000538064 G3V3G9 751 aa18.97■□□□□ 0.63
LRRK1-211ENST00000538064 CSF1RP07333 972 aa18.97■□□□□ 0.63
LRRK1-211ENST00000538064 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
LRRK1-211ENST00000538064 ITGA6P23229 1130 aa18.97■□□□□ 0.63
LRRK1-211ENST00000538064 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
LRRK1-211ENST00000538064 VEGFBP49765 207 aa18.97■□□□□ 0.63
LRRK1-211ENST00000538064 FMR1Q06787 632 aaKnown RBP eCLIP18.97■□□□□ 0.63
LRRK1-211ENST00000538064 DCAF8Q5TAQ9 597 aa18.97■□□□□ 0.63
LRRK1-211ENST00000538064 ABT1Q9ULW3 272 aaKnown RBP18.97■□□□□ 0.63
LRRK1-211ENST00000538064 CCT4P50991 539 aaKnown RBP18.95■□□□□ 0.62
LRRK1-211ENST00000538064 DEFB115Q30KQ5 88 aa18.95■□□□□ 0.62
LRRK1-211ENST00000538064 GLIS2Q9BZE0 524 aaPredicted RBP18.95■□□□□ 0.62
LRRK1-211ENST00000538064 E9PSI1 815 aa18.94■□□□□ 0.62
LRRK1-211ENST00000538064 CST9Q5W186 159 aa18.94■□□□□ 0.62
LRRK1-211ENST00000538064 SAMD7Q7Z3H4 446 aa18.94■□□□□ 0.62
LRRK1-211ENST00000538064 PODNQ7Z5L7 613 aa18.94■□□□□ 0.62
LRRK1-211ENST00000538064 GRM8O00222 908 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 EGFRP00533 1210 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 FOXO4P98177 505 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 TBC1D10BQ4KMP7 808 aaPredicted RBP18.93■□□□□ 0.62
LRRK1-211ENST00000538064 RSBN1LQ6PCB5 846 aaPredicted RBP18.93■□□□□ 0.62
LRRK1-211ENST00000538064 CDC37L1Q7L3B6 337 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 AGBL3Q8NEM8 1001 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 MPHOSPH8Q99549 860 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 ANKRD2Q9GZV1 360 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 LEMD3Q9Y2U8 911 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 TLL2Q9Y6L7 1015 aa18.93■□□□□ 0.62
LRRK1-211ENST00000538064 ANKRD18BA2A2Z9 1011 aa18.92■□□□□ 0.62
LRRK1-211ENST00000538064 ALDH1L1O75891 902 aa18.92■□□□□ 0.62
LRRK1-211ENST00000538064 CELF2O95319 508 aaKnown RBP18.92■□□□□ 0.62
LRRK1-211ENST00000538064 KIF4BQ2VIQ3 1234 aa18.92■□□□□ 0.62
LRRK1-211ENST00000538064 COL13A1Q5TAT6 717 aaPredicted RBP18.92■□□□□ 0.62
LRRK1-211ENST00000538064 WDR33Q9C0J8 1336 aaKnown RBP18.92■□□□□ 0.62
LRRK1-211ENST00000538064 WTIPA6NIX2 430 aaPredicted RBP18.91■□□□□ 0.62
LRRK1-211ENST00000538064 ZNF280AP59817 542 aaPredicted RBP18.91■□□□□ 0.62
LRRK1-211ENST00000538064 ZNF804BA4D1E1 1349 aa18.91■□□□□ 0.62
LRRK1-211ENST00000538064 USP17L3A6NCW0 530 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 USP17L4A6NCW7 530 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 SLFN5Q08AF3 891 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 IFIT5Q13325 482 aaKnown RBP18.9■□□□□ 0.62
LRRK1-211ENST00000538064 USP17L1Q7RTZ2 530 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 GMLQ99445 158 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 COA1Q9GZY4 146 aa18.9■□□□□ 0.62
LRRK1-211ENST00000538064 ECE1P42892 770 aa18.89■□□□□ 0.61
LRRK1-211ENST00000538064 CHRNDQ07001 517 aa18.89■□□□□ 0.61
LRRK1-211ENST00000538064 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
LRRK1-211ENST00000538064 MRPL50Q8N5N7 158 aaKnown RBP18.89■□□□□ 0.61
LRRK1-211ENST00000538064 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
LRRK1-211ENST00000538064 C9orf78Q9NZ63 289 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms