RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 DNMT3LQ9UJW3 386 aa11.46□□□□□ -0.57
LMO3-216ENST00000537568 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.58
LMO3-216ENST00000537568 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
LMO3-216ENST00000537568 PALM3A6NDB9 673 aaPredicted RBP11.45□□□□□ -0.58
LMO3-216ENST00000537568 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
LMO3-216ENST00000537568 IRF7Q92985 503 aa11.45□□□□□ -0.58
LMO3-216ENST00000537568 NMRK2Q9NPI5 230 aa11.45□□□□□ -0.58
LMO3-216ENST00000537568 TMPRSS4Q9NRS4 437 aa11.45□□□□□ -0.58
LMO3-216ENST00000537568 ANKRD50Q9ULJ7 1429 aa11.44□□□□□ -0.58
LMO3-216ENST00000537568 RGPD8O14715 1765 aaPredicted RBP11.44□□□□□ -0.58
LMO3-216ENST00000537568 KIAA1210Q9ULL0 1709 aa11.44□□□□□ -0.58
LMO3-216ENST00000537568 ZBBXA8MT70 800 aa11.44□□□□□ -0.58
LMO3-216ENST00000537568 FBXO45P0C2W1 286 aa11.44□□□□□ -0.58
LMO3-216ENST00000537568 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
LMO3-216ENST00000537568 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
LMO3-216ENST00000537568 TULP4Q9NRJ4 1543 aa11.44□□□□□ -0.58
LMO3-216ENST00000537568 BCL9O00512 1426 aa11.43□□□□□ -0.58
LMO3-216ENST00000537568 GMPRP36959 345 aa11.43□□□□□ -0.58
LMO3-216ENST00000537568 RGS19P49795 217 aa11.43□□□□□ -0.58
LMO3-216ENST00000537568 CDCA8Q53HL2 280 aa11.43□□□□□ -0.58
LMO3-216ENST00000537568 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
LMO3-216ENST00000537568 ALG2Q9H553 416 aa11.43□□□□□ -0.58
LMO3-216ENST00000537568 TTLL8A6PVC2 850 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 ESPNB1AK53 854 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 ERVH48-1M5A8F1 160 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 SPINT1O43278 529 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
LMO3-216ENST00000537568 POLD1P28340 1107 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 INSM1Q01101 510 aaPredicted RBP11.42□□□□□ -0.58
LMO3-216ENST00000537568 MLLT1Q03111 559 aaPredicted RBP11.42□□□□□ -0.58
LMO3-216ENST00000537568 TFIP11Q9UBB9 837 aaKnown RBP11.42□□□□□ -0.58
LMO3-216ENST00000537568 PDE4DIPQ5VU43 2346 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 LRRC37A3O60309 1634 aa11.42□□□□□ -0.58
LMO3-216ENST00000537568 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
LMO3-216ENST00000537568 KANK4Q5T7N3 995 aaPredicted RBP11.41□□□□□ -0.58
LMO3-216ENST00000537568 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
LMO3-216ENST00000537568 RELBQ01201 579 aa11.4□□□□□ -0.58
LMO3-216ENST00000537568 PMFBP1Q8TBY8 1022 aa11.4□□□□□ -0.58
LMO3-216ENST00000537568 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.58
LMO3-216ENST00000537568 THRAP3Q9Y2W1 955 aaKnown RBP11.4□□□□□ -0.58
LMO3-216ENST00000537568 PCDHB9Q9Y5E1 797 aa11.4□□□□□ -0.58
LMO3-216ENST00000537568 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
LMO3-216ENST00000537568 ABHD8Q96I13 439 aa11.39□□□□□ -0.59
LMO3-216ENST00000537568 UCN2Q96RP3 112 aa11.39□□□□□ -0.59
LMO3-216ENST00000537568 FIGNL2A6NMB9 653 aa11.38□□□□□ -0.59
LMO3-216ENST00000537568 LILRA1O75019 489 aa11.38□□□□□ -0.59
LMO3-216ENST00000537568 ZC3H6P61129 1189 aaKnown RBP11.38□□□□□ -0.59
LMO3-216ENST00000537568 FSTL1Q12841 308 aa11.38□□□□□ -0.59
LMO3-216ENST00000537568 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.38□□□□□ -0.59
LMO3-216ENST00000537568 IVNS1ABPQ9Y6Y0 642 aa11.38□□□□□ -0.59
LMO3-216ENST00000537568 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
LMO3-216ENST00000537568 USP19O94966 1318 aa11.37□□□□□ -0.59
LMO3-216ENST00000537568 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
LMO3-216ENST00000537568 FOXN1O15353 648 aa11.37□□□□□ -0.59
LMO3-216ENST00000537568 PPFIA3O75145 1194 aa11.37□□□□□ -0.59
LMO3-216ENST00000537568 ADD1P35611 737 aaKnown RBP11.37□□□□□ -0.59
LMO3-216ENST00000537568 SEMA3FQ13275 785 aa11.37□□□□□ -0.59
LMO3-216ENST00000537568 STK26Q9P289 416 aa11.37□□□□□ -0.59
LMO3-216ENST00000537568 ADH1AP07327 375 aa11.36□□□□□ -0.59
LMO3-216ENST00000537568 CTSOP43234 321 aaPredicted RBP11.36□□□□□ -0.59
LMO3-216ENST00000537568 EVA1CP58658 441 aa11.36□□□□□ -0.59
LMO3-216ENST00000537568 INSM2Q96T92 566 aaPredicted RBP11.36□□□□□ -0.59
LMO3-216ENST00000537568 ZNF395Q9H8N7 513 aaPredicted RBP11.36□□□□□ -0.59
LMO3-216ENST00000537568 VRTNQ9H8Y1 702 aa11.36□□□□□ -0.59
LMO3-216ENST00000537568 PRDM10Q9NQV6 1147 aa11.36□□□□□ -0.59
LMO3-216ENST00000537568 VSIG8P0DPA2 414 aa11.35□□□□□ -0.59
LMO3-216ENST00000537568 SOX11P35716 441 aa11.35□□□□□ -0.59
LMO3-216ENST00000537568 NR1H3Q13133 447 aa11.35□□□□□ -0.59
LMO3-216ENST00000537568 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
LMO3-216ENST00000537568 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
LMO3-216ENST00000537568 ABCC11Q96J66 1382 aa11.35□□□□□ -0.59
LMO3-216ENST00000537568 PTSQ03393 145 aa11.34□□□□□ -0.59
LMO3-216ENST00000537568 DDB1Q16531 1140 aa11.34□□□□□ -0.59
LMO3-216ENST00000537568 KDF1Q8NAX2 398 aaPredicted RBP11.34□□□□□ -0.59
LMO3-216ENST00000537568 STK17AQ9UEE5 414 aa11.34□□□□□ -0.59
LMO3-216ENST00000537568 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
LMO3-216ENST00000537568 IFT172Q9UG01 1749 aa11.34□□□□□ -0.59
LMO3-216ENST00000537568 CICQ96RK0 1608 aaPredicted RBP11.34□□□□□ -0.59
LMO3-216ENST00000537568 QSER1Q2KHR3 1735 aa11.33□□□□□ -0.6
LMO3-216ENST00000537568 ATG7O95352 703 aa11.33□□□□□ -0.6
LMO3-216ENST00000537568 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
LMO3-216ENST00000537568 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
LMO3-216ENST00000537568 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
LMO3-216ENST00000537568 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
LMO3-216ENST00000537568 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
LMO3-216ENST00000537568 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
LMO3-216ENST00000537568 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
LMO3-216ENST00000537568 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
LMO3-216ENST00000537568 PTGIRP43119 386 aa11.3□□□□□ -0.6
LMO3-216ENST00000537568 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
LMO3-216ENST00000537568 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
LMO3-216ENST00000537568 CRB1P82279 1406 aa11.29□□□□□ -0.6
LMO3-216ENST00000537568 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
LMO3-216ENST00000537568 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
LMO3-216ENST00000537568 TMEM132EQ6IEE7 984 aa11.29□□□□□ -0.6
LMO3-216ENST00000537568 SND1Q7KZF4 910 aaKnown RBP eCLIP11.29□□□□□ -0.6
LMO3-216ENST00000537568 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
LMO3-216ENST00000537568 CLSPNQ9HAW4 1339 aa11.29□□□□□ -0.6
LMO3-216ENST00000537568 CPDO75976 1380 aa11.28□□□□□ -0.6
LMO3-216ENST00000537568 VPS8Q8N3P4 1428 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms