RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 MRVI1Q9Y6F6 885 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 SLFNL1Q499Z3 407 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 STOX1Q6ZVD7 989 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 DDX11Q96FC9 970 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 GOLIM4O00461 696 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 FGD1P98174 961 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 SCRN1Q12765 414 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 RESTQ13127 1097 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 C17orf53Q8N3J3 647 aaPredicted RBP16.93■□□□□ 0.3
USP44-203ENST00000537435 DDX19AQ9NUU7 478 aaKnown RBP16.93■□□□□ 0.3
USP44-203ENST00000537435 FAM13BQ9NYF5 915 aa16.93■□□□□ 0.3
USP44-203ENST00000537435 H3BQV1 296 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 TIMM10P62072 90 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 PAG1Q9NWQ8 432 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 PALLDQ8WX93 1383 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
USP44-203ENST00000537435 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
USP44-203ENST00000537435 DYNC1I1O14576 645 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 HELLSQ9NRZ9 838 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 GLI3P10071 1580 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 LUZP1Q86V48 1076 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 SPC24Q8NBT2 197 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 CLSTN2Q9H4D0 955 aa16.91■□□□□ 0.3
USP44-203ENST00000537435 NR1I2O75469 434 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 HMGB1P09429 215 aaKnown RBP16.9■□□□□ 0.3
USP44-203ENST00000537435 DHX32Q7L7V1 743 aaKnown RBP16.9■□□□□ 0.3
USP44-203ENST00000537435 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 SMARCC2Q8TAQ2 1214 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 GPR108Q9NPR9 543 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 PFKFB2O60825 505 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 IL15P40933 162 aaPredicted RBP16.9■□□□□ 0.3
USP44-203ENST00000537435 ANO6Q4KMQ2 910 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 LRRC24Q50LG9 513 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
USP44-203ENST00000537435 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
USP44-203ENST00000537435 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
USP44-203ENST00000537435 A1BGP04217 495 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 LLPHQ9BRT6 129 aaKnown RBP16.89■□□□□ 0.29
USP44-203ENST00000537435 KCNF1Q9H3M0 494 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 SPTLC3Q9NUV7 552 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 APOBRQ0VD83 1088 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 ZMYM1Q5SVZ6 1142 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 NSUN7Q8NE18 718 aaKnown RBP16.89■□□□□ 0.29
USP44-203ENST00000537435 ZNF594Q96JF6 807 aaPredicted RBP16.89■□□□□ 0.29
USP44-203ENST00000537435 ZBTB3Q9H5J0 574 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
USP44-203ENST00000537435 SPATA31A3Q5VYP0 1347 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 EYA2O00167 538 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 TPM3P06753 285 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
USP44-203ENST00000537435 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
USP44-203ENST00000537435 FOSBP53539 338 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 CFAP45Q9UL16 551 aa16.88■□□□□ 0.29
USP44-203ENST00000537435 DCCP43146 1447 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 CPDO75976 1380 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 EXOSC10Q01780 885 aaKnown RBP16.87■□□□□ 0.29
USP44-203ENST00000537435 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 KIAA1524Q8TCG1 905 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 PYCARDQ9ULZ3 195 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 A0A1B0GUL7 405 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 CEBPZQ03701 1054 aaKnown RBP16.87■□□□□ 0.29
USP44-203ENST00000537435 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
USP44-203ENST00000537435 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
USP44-203ENST00000537435 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
USP44-203ENST00000537435 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
USP44-203ENST00000537435 E7EWF7 191 aa16.86■□□□□ 0.29
USP44-203ENST00000537435 CCT2P78371 535 aaKnown RBP16.86■□□□□ 0.29
USP44-203ENST00000537435 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
USP44-203ENST00000537435 AGXT2Q9BYV1 514 aa16.86■□□□□ 0.29
USP44-203ENST00000537435 MAST3O60307 1309 aa16.86■□□□□ 0.29
USP44-203ENST00000537435 RNF113AO15541 343 aaKnown RBP16.86■□□□□ 0.29
USP44-203ENST00000537435 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
USP44-203ENST00000537435 NAA16Q6N069 864 aaPredicted RBP16.86■□□□□ 0.29
USP44-203ENST00000537435 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
USP44-203ENST00000537435 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
USP44-203ENST00000537435 TOM1L2Q6ZVM7 507 aa16.85■□□□□ 0.29
USP44-203ENST00000537435 TICAM2Q86XR7 235 aa16.85■□□□□ 0.29
USP44-203ENST00000537435 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
USP44-203ENST00000537435 ERVV-2B6SEH9 535 aa16.85■□□□□ 0.29
USP44-203ENST00000537435 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
USP44-203ENST00000537435 CIAO1O76071 339 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 PTGS1P23219 599 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 ZNF165P49910 485 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 FTOQ9C0B1 505 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms