RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 NLRP10Q86W26 655 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 SUPT20HQ8NEM7 779 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 UTP14AQ9BVJ6 771 aaKnown RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 ADARB2Q9NS39 739 aaKnown RBP6.9□□□□□ -1.3
SNHG1-204ENST00000537068 TSPYL4Q9UJ04 414 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 ZNRF3Q9ULT6 936 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 ABCC4O15439 1325 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 CDHR2Q9BYE9 1310 aa6.9□□□□□ -1.3
SNHG1-204ENST00000537068 TTLL13PA6NNM8 815 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 PPIP5K2O43314 1243 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 EIF2S2P20042 333 aaKnown RBP6.89□□□□□ -1.31
SNHG1-204ENST00000537068 MAP2K2P36507 400 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-204ENST00000537068 RALBP1Q15311 655 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 E2F4Q16254 413 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 HSP90AB3PQ58FF7 597 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 MAMSTRQ6ZN01 415 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 SAPCD2Q86UD0 394 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 ZC3H15Q8WU90 426 aaKnown RBP6.89□□□□□ -1.31
SNHG1-204ENST00000537068 AIDAQ96BJ3 306 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 LARP6Q9BRS8 491 aaKnown RBP6.89□□□□□ -1.31
SNHG1-204ENST00000537068 BMP2KQ9NSY1 1161 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-204ENST00000537068 COL4A1P02462 1669 aa6.89□□□□□ -1.31
SNHG1-204ENST00000537068 SCN9AQ15858 1988 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 CASP8AP2Q9UKL3 1982 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 MAPK8IP3Q9UPT6 1336 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 YDJCA8MPS7 323 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 TRAF5O00463 557 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 ANXA1P04083 346 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 HOXB7P09629 217 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 ECE1P42892 770 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 RGS19P49795 217 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 GRAPQ13588 217 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 SF3B3Q15393 1217 aaKnown RBP6.88□□□□□ -1.31
SNHG1-204ENST00000537068 CIAPIN1Q6FI81 312 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 TMC4Q7Z404 712 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 MPNDQ8N594 471 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 GRAPLQ8TC17 118 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-204ENST00000537068 XAGE3Q8WTP9 111 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 DPF2Q92785 391 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 CAPNS2Q96L46 248 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 GPR101Q96P66 508 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-204ENST00000537068 ISCA1Q9BUE6 129 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 ABT1Q9ULW3 272 aaKnown RBP6.88□□□□□ -1.31
SNHG1-204ENST00000537068 TRIM35Q9UPQ4 493 aa6.88□□□□□ -1.31
SNHG1-204ENST00000537068 SH3TC1Q8TE82 1336 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 TCERG1O14776 1098 aaKnown RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 GMPSP49915 693 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 LMOD3Q0VAK6 560 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 TRIM28Q13263 835 aaKnown RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 TNIP1Q15025 636 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 CYP4F22Q6NT55 531 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 DPP8Q6V1X1 898 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 ANKRD13DQ6ZTN6 518 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 ABHD8Q96I13 439 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 TRMT112Q9UI30 125 aaKnown RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 AKAP11Q9UKA4 1901 aa6.87□□□□□ -1.31
SNHG1-204ENST00000537068 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-204ENST00000537068 MYH3P11055 1940 aa6.86□□□□□ -1.31
SNHG1-204ENST00000537068 POTEFA5A3E0 1075 aa6.86□□□□□ -1.31
SNHG1-204ENST00000537068 SEMA3EO15041 775 aa6.86□□□□□ -1.31
SNHG1-204ENST00000537068 AIMP1Q12904 312 aaKnown RBP6.86□□□□□ -1.31
SNHG1-204ENST00000537068 KRT24Q2M2I5 525 aa6.86□□□□□ -1.31
SNHG1-204ENST00000537068 DDX46Q7L014 1031 aaKnown RBP6.86□□□□□ -1.31
SNHG1-204ENST00000537068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.86□□□□□ -1.31
SNHG1-204ENST00000537068 CDC37L1Q7L3B6 337 aa6.86□□□□□ -1.31
SNHG1-204ENST00000537068 GLIS2Q9BZE0 524 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-204ENST00000537068 TMX4Q9H1E5 349 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-204ENST00000537068 CNOT7Q9UIV1 285 aaKnown RBP6.86□□□□□ -1.31
SNHG1-204ENST00000537068 ZNF609O15014 1411 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 CA12O43570 354 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 AOC2O75106 756 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 RAD17O75943 681 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 CELF2O95319 508 aaKnown RBP6.85□□□□□ -1.31
SNHG1-204ENST00000537068 ZNF853P0CG23 659 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 PDE4AP27815 886 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 BRPF1P55201 1214 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-204ENST00000537068 WASHC4Q2M389 1173 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 TRPM4Q8TD43 1214 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 NECTIN2Q92692 538 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 CELF1Q92879 486 aaKnown RBP6.85□□□□□ -1.31
SNHG1-204ENST00000537068 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 CRISPLD2Q9H0B8 497 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 CHPF2Q9P2E5 772 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 DBF4Q9UBU7 674 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-204ENST00000537068 POLLQ9UGP5 575 aa6.85□□□□□ -1.31
SNHG1-204ENST00000537068 RTL9Q8NET4 1388 aa6.84□□□□□ -1.31
SNHG1-204ENST00000537068 MYBBP1AQ9BQG0 1328 aaKnown RBP6.84□□□□□ -1.31
SNHG1-204ENST00000537068 SHTN1A0MZ66 631 aa6.84□□□□□ -1.31
SNHG1-204ENST00000537068 H7C1D1 291 aa6.84□□□□□ -1.31
SNHG1-204ENST00000537068 PSMD14O00487 310 aa6.84□□□□□ -1.31
SNHG1-204ENST00000537068 VIL1P09327 827 aaKnown RBP6.84□□□□□ -1.31
SNHG1-204ENST00000537068 RPS12P25398 132 aaKnown RBP6.84□□□□□ -1.31
SNHG1-204ENST00000537068 RPS8P62241 208 aaKnown RBP6.84□□□□□ -1.31
SNHG1-204ENST00000537068 MFSD10Q14728 455 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms