RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PDCP20941 246 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 TIMM10P62072 90 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 PKP1Q13835 747 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
SMG6-203ENST00000536871 GOLIM4O00461 696 aa16.18■□□□□ 0.18
SMG6-203ENST00000536871 RNF113AO15541 343 aaKnown RBP16.18■□□□□ 0.18
SMG6-203ENST00000536871 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
SMG6-203ENST00000536871 HLFQ16534 295 aa16.18■□□□□ 0.18
SMG6-203ENST00000536871 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
SMG6-203ENST00000536871 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
SMG6-203ENST00000536871 ZNF589Q86UQ0 364 aaPredicted RBP16.18■□□□□ 0.18
SMG6-203ENST00000536871 ZNF594Q96JF6 807 aaPredicted RBP16.18■□□□□ 0.18
SMG6-203ENST00000536871 LDHAL6AQ6ZMR3 332 aa16.18■□□□□ 0.18
SMG6-203ENST00000536871 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
SMG6-203ENST00000536871 RIPOR2Q9Y4F9 1068 aa16.18■□□□□ 0.18
SMG6-203ENST00000536871 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 ITGA6P23229 1130 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 SIK1P57059 783 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
SMG6-203ENST00000536871 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
SMG6-203ENST00000536871 XAGE2Q96GT9 111 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 RREB1Q92766 1687 aa16.17■□□□□ 0.18
SMG6-203ENST00000536871 STX6O43752 255 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
SMG6-203ENST00000536871 ZNF445P59923 1031 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 ATP2B3Q16720 1220 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 EDC3Q96F86 508 aaKnown RBP16.16■□□□□ 0.18
SMG6-203ENST00000536871 PUS3Q9BZE2 481 aaKnown RBP16.16■□□□□ 0.18
SMG6-203ENST00000536871 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMG6-203ENST00000536871 CTNNA3Q9UI47 895 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 ZNF831Q5JPB2 1677 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 GPTP24298 496 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
SMG6-203ENST00000536871 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 CNNM1Q9NRU3 951 aa16.16■□□□□ 0.18
SMG6-203ENST00000536871 PRPF40AO75400 957 aaKnown RBP16.15■□□□□ 0.18
SMG6-203ENST00000536871 UQCRFS1P1P0C7P4 283 aa16.15■□□□□ 0.18
SMG6-203ENST00000536871 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
SMG6-203ENST00000536871 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
SMG6-203ENST00000536871 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
SMG6-203ENST00000536871 CCDC9Q9Y3X0 531 aaKnown RBP16.15■□□□□ 0.18
SMG6-203ENST00000536871 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
SMG6-203ENST00000536871 VPS72Q15906 364 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 PKNOX2Q96KN3 472 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 SYT1P21579 422 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 GREM2Q9H772 168 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
SMG6-203ENST00000536871 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.13■□□□□ 0.17
SMG6-203ENST00000536871 NUTM2BA6NNL0 878 aaPredicted RBP16.13■□□□□ 0.17
SMG6-203ENST00000536871 NUTM2EB1AL46 878 aaPredicted RBP16.13■□□□□ 0.17
SMG6-203ENST00000536871 PHF14O94880 888 aa16.13■□□□□ 0.17
SMG6-203ENST00000536871 PDE8BO95263 885 aa16.13■□□□□ 0.17
SMG6-203ENST00000536871 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMG6-203ENST00000536871 ME3Q16798 604 aa16.13■□□□□ 0.17
SMG6-203ENST00000536871 NUTM2AQ8IVF1 878 aaPredicted RBP16.13■□□□□ 0.17
SMG6-203ENST00000536871 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
SMG6-203ENST00000536871 RIC1Q4ADV7 1423 aa16.13■□□□□ 0.17
SMG6-203ENST00000536871 GJB2P29033 226 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 LPIN2Q92539 896 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 APPBP2Q92624 585 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 TPCN1Q9ULQ1 816 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 KIF3AQ9Y496 699 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 LRP5O75197 1615 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 UBN2Q6ZU65 1347 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 F13A1P00488 732 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 FKBP4Q02790 459 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMG6-203ENST00000536871 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
SMG6-203ENST00000536871 CCDC152Q4G0S7 254 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 DHX32Q7L7V1 743 aaKnown RBP16.12■□□□□ 0.17
SMG6-203ENST00000536871 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 VGLL2Q8N8G2 317 aa16.12■□□□□ 0.17
SMG6-203ENST00000536871 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
SMG6-203ENST00000536871 NUP98P52948 1817 aa16.11■□□□□ 0.17
SMG6-203ENST00000536871 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
SMG6-203ENST00000536871 CYP21A2P08686 494 aa16.11■□□□□ 0.17
SMG6-203ENST00000536871 CPA1P15085 419 aa16.11■□□□□ 0.17
SMG6-203ENST00000536871 ANP32BQ92688 251 aaKnown RBP16.11■□□□□ 0.17
SMG6-203ENST00000536871 MAST3O60307 1309 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
SMG6-203ENST00000536871 TOB2Q14106 344 aaPredicted RBP16.1■□□□□ 0.17
SMG6-203ENST00000536871 MYH3P11055 1940 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 SLC5A1P13866 664 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 ARID4AP29374 1257 aaPredicted RBP16.1■□□□□ 0.17
SMG6-203ENST00000536871 ZSCAN23Q3MJ62 389 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 CAVIN1Q6NZI2 390 aaKnown RBP16.1■□□□□ 0.17
SMG6-203ENST00000536871 ACSBG1Q96GR2 724 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 SEC62Q99442 399 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms