RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-208ENST00000536582 POLD1P28340 1107 aa12.11□□□□□ -0.47
PAAF1-208ENST00000536582 ST5P78524 1137 aa12.11□□□□□ -0.47
PAAF1-208ENST00000536582 CHMP4BQ9H444 224 aaKnown RBP12.11□□□□□ -0.47
PAAF1-208ENST00000536582 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
PAAF1-208ENST00000536582 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
PAAF1-208ENST00000536582 FOXO4P98177 505 aa12.1□□□□□ -0.47
PAAF1-208ENST00000536582 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
PAAF1-208ENST00000536582 PPP1R1BQ9UD71 204 aaPredicted RBP12.1□□□□□ -0.47
PAAF1-208ENST00000536582 CDHR2Q9BYE9 1310 aa12.1□□□□□ -0.47
PAAF1-208ENST00000536582 PDE8AO60658 829 aa12.09□□□□□ -0.47
PAAF1-208ENST00000536582 SLC10A5Q5PT55 438 aa12.09□□□□□ -0.47
PAAF1-208ENST00000536582 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
PAAF1-208ENST00000536582 IBTKQ9P2D0 1353 aaPredicted RBP12.08□□□□□ -0.48
PAAF1-208ENST00000536582 LAMB2P55268 1798 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 MYH3P11055 1940 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 TNRC6CQ9HCJ0 1690 aaKnown RBP12.08□□□□□ -0.48
PAAF1-208ENST00000536582 CTSWP56202 376 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
PAAF1-208ENST00000536582 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 SPON1Q9HCB6 807 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 HDAC5Q9UQL6 1122 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 NRXN2Q9P2S2 1712 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
PAAF1-208ENST00000536582 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 SRGAP3O43295 1099 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 TAF1P21675 1872 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 PTGER2P43116 358 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 SIRT2Q8IXJ6 389 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 PLA2G12BQ9BX93 195 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 GREM2Q9H772 168 aa12.07□□□□□ -0.48
PAAF1-208ENST00000536582 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
PAAF1-208ENST00000536582 CHRNA5P30532 468 aa12.06□□□□□ -0.48
PAAF1-208ENST00000536582 LCE2DQ5TA82 110 aaPredicted RBP12.06□□□□□ -0.48
PAAF1-208ENST00000536582 KLHDC4Q8TBB5 520 aa12.06□□□□□ -0.48
PAAF1-208ENST00000536582 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
PAAF1-208ENST00000536582 BRIP1Q9BX63 1249 aa12.06□□□□□ -0.48
PAAF1-208ENST00000536582 SEC31BQ9NQW1 1179 aa12.06□□□□□ -0.48
PAAF1-208ENST00000536582 CSF1RP07333 972 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 PDE6BP35913 854 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 B4GALNT3Q6L9W6 998 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 C2CD5Q86YS7 1000 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 RPAP2Q8IXW5 612 aaPredicted RBP12.05□□□□□ -0.48
PAAF1-208ENST00000536582 RPGRQ92834 1020 aaKnown RBP12.05□□□□□ -0.48
PAAF1-208ENST00000536582 BCL11AQ9H165 835 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 WWC3Q9ULE0 1092 aa12.05□□□□□ -0.48
PAAF1-208ENST00000536582 PA2G4Q9UQ80 394 aaKnown RBP12.05□□□□□ -0.48
PAAF1-208ENST00000536582 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 IGHDP01880 384 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 ITGA6P23229 1130 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 IFIT5Q13325 482 aaKnown RBP12.04□□□□□ -0.48
PAAF1-208ENST00000536582 AAMPQ13685 434 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
PAAF1-208ENST00000536582 CCDC57Q2TAC2 916 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 RABL6Q3YEC7 729 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-208ENST00000536582 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 ZNF622Q969S3 477 aaKnown RBP eCLIP12.04□□□□□ -0.48
PAAF1-208ENST00000536582 SIL1Q9H173 461 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
PAAF1-208ENST00000536582 ANKRD18BA2A2Z9 1011 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 H0YIN7 160 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 APBB1O00213 710 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 SNPHO15079 494 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 DDX46Q7L014 1031 aaKnown RBP12.03□□□□□ -0.48
PAAF1-208ENST00000536582 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 PPP4R2Q9NY27 417 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 COL4A1P02462 1669 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-208ENST00000536582 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
PAAF1-208ENST00000536582 CACNA1SQ13698 1873 aa12.02□□□□□ -0.48
PAAF1-208ENST00000536582 HMMRO75330 724 aa12.02□□□□□ -0.49
PAAF1-208ENST00000536582 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
PAAF1-208ENST00000536582 DPEP1P16444 411 aa12.02□□□□□ -0.49
PAAF1-208ENST00000536582 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
PAAF1-208ENST00000536582 MTX1Q13505 466 aa12.02□□□□□ -0.49
PAAF1-208ENST00000536582 SSH3Q8TE77 659 aa12.02□□□□□ -0.49
PAAF1-208ENST00000536582 CELF1Q92879 486 aaKnown RBP12.02□□□□□ -0.49
PAAF1-208ENST00000536582 RBM17Q96I25 401 aaKnown RBP12.02□□□□□ -0.49
PAAF1-208ENST00000536582 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.49
PAAF1-208ENST00000536582 RWDD1Q9H446 243 aaPredicted RBP12.02□□□□□ -0.49
PAAF1-208ENST00000536582 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
PAAF1-208ENST00000536582 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
PAAF1-208ENST00000536582 SRGNP10124 158 aa12.01□□□□□ -0.49
PAAF1-208ENST00000536582 NPR1P16066 1061 aa12.01□□□□□ -0.49
PAAF1-208ENST00000536582 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
PAAF1-208ENST00000536582 OS9Q13438 667 aaPredicted RBP12.01□□□□□ -0.49
PAAF1-208ENST00000536582 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
PAAF1-208ENST00000536582 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
PAAF1-208ENST00000536582 SLC51AQ86UW1 340 aa12.01□□□□□ -0.49
PAAF1-208ENST00000536582 RIC1Q4ADV7 1423 aa12.01□□□□□ -0.49
PAAF1-208ENST00000536582 IGHMBP2P38935 993 aaKnown RBP12□□□□□ -0.49
PAAF1-208ENST00000536582 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
PAAF1-208ENST00000536582 HDAC1Q13547 482 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms