RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 TBC1D9BQ66K14 1250 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 RUFY2Q8WXA3 655 aa9.83□□□□□ -0.84
ABCA4-207ENST00000536513 IBTKQ9P2D0 1353 aaPredicted RBP9.83□□□□□ -0.84
ABCA4-207ENST00000536513 ATP10DQ9P241 1426 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.82□□□□□ -0.84
ABCA4-207ENST00000536513 XAGE2Q96GT9 111 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
ABCA4-207ENST00000536513 CCDC82Q8N4S0 544 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 GYG1P46976 350 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 NASPP49321 788 aaPredicted RBP9.82□□□□□ -0.84
ABCA4-207ENST00000536513 MAPK8IP2Q13387 824 aaPredicted RBP9.82□□□□□ -0.84
ABCA4-207ENST00000536513 VPS72Q15906 364 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 PDCL3Q9H2J4 239 aa9.82□□□□□ -0.84
ABCA4-207ENST00000536513 A0A0D9SFI3 127 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 BCAMP50895 628 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 PTH1RQ03431 593 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 NECAB1Q8N987 351 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 ZBTB38Q8NAP3 1195 aaPredicted RBP9.81□□□□□ -0.84
ABCA4-207ENST00000536513 PIBF1Q8WXW3 757 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 ARHGEF1Q92888 912 aaKnown RBP9.81□□□□□ -0.84
ABCA4-207ENST00000536513 NLRP3Q96P20 1036 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 VPS37CA5D8V6 355 aaPredicted RBP9.81□□□□□ -0.84
ABCA4-207ENST00000536513 ZAP70P43403 619 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 CTSWP56202 376 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 AMIGO3Q86WK7 504 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 MPNDQ8N594 471 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 ZGPATQ8N5A5 531 aaKnown RBP9.81□□□□□ -0.84
ABCA4-207ENST00000536513 ROBO1Q9Y6N7 1651 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
ABCA4-207ENST00000536513 TTLL11Q8NHH1 800 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 DDX11Q96FC9 970 aa9.81□□□□□ -0.84
ABCA4-207ENST00000536513 IL6STP40189 918 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-207ENST00000536513 IL15P40933 162 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-207ENST00000536513 SLC9C2Q5TAH2 1124 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 MINDY4BA8MYZ0 360 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 RXRBP28702 533 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 PHKA1P46020 1223 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 NKX1-1Q15270 411 aaPredicted RBP9.8□□□□□ -0.84
ABCA4-207ENST00000536513 CCDC152Q4G0S7 254 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 INTS5Q6P9B9 1019 aaKnown RBP9.8□□□□□ -0.84
ABCA4-207ENST00000536513 FERMT3Q86UX7 667 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 ANKRD18AQ8IVF6 992 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 USP26Q9BXU7 913 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 UBN2Q6ZU65 1347 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 FOXO4P98177 505 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 SCARF1Q14162 830 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 CCDC144CPQ8IYA2 1237 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 RPGRQ92834 1020 aaKnown RBP9.8□□□□□ -0.84
ABCA4-207ENST00000536513 PAG1Q9NWQ8 432 aa9.8□□□□□ -0.84
ABCA4-207ENST00000536513 NCAPD2Q15021 1401 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 H7C1W4 665 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 PDE8AO60658 829 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 POLA2Q14181 598 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 TTLL5Q6EMB2 1281 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 ZNF589Q86UQ0 364 aaPredicted RBP9.79□□□□□ -0.84
ABCA4-207ENST00000536513 GDPD2Q9HCC8 539 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 KIAA2012Q0VF49 1180 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 C3orf67Q6ZVT6 689 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 CNBD1Q8NA66 436 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 EVI5LQ96CN4 794 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 ZFP91Q96JP5 570 aaPredicted RBP9.79□□□□□ -0.84
ABCA4-207ENST00000536513 RBM8AQ9Y5S9 174 aaKnown RBP9.79□□□□□ -0.84
ABCA4-207ENST00000536513 CEBPZQ03701 1054 aaKnown RBP9.79□□□□□ -0.84
ABCA4-207ENST00000536513 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 CCDC83Q8IWF9 413 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
ABCA4-207ENST00000536513 CELF1Q92879 486 aaKnown RBP9.79□□□□□ -0.84
ABCA4-207ENST00000536513 THRAP3Q9Y2W1 955 aaKnown RBP9.79□□□□□ -0.84
ABCA4-207ENST00000536513 SLIT3O75094 1523 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 VPS53Q5VIR6 699 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 OLFM4Q6UX06 510 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 PI4K2BQ8TCG2 481 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 TMX4Q9H1E5 349 aaPredicted RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 K7ELQ4 463 aaPredicted RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 PCCAP05165 728 aaPredicted RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 EIF5P55010 431 aaKnown RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 CNPY4Q8N129 248 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 RXRAP19793 462 aa9.78□□□□□ -0.84
ABCA4-207ENST00000536513 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
ABCA4-207ENST00000536513 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 UQCRHP07919 91 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 GUCY1B3Q02153 619 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 RNF214Q8ND24 703 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 SSFA2P28290 1259 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 ADCK5Q3MIX3 580 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 MAP7D2Q96T17 732 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 AKAP2Q9Y2D5 859 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.77□□□□□ -0.85
ABCA4-207ENST00000536513 KIF1AQ12756 1690 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 PKP1Q13835 747 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 TXNRD1Q16881 649 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 COPRSQ9NQ92 184 aa9.77□□□□□ -0.85
ABCA4-207ENST00000536513 A0A0G2JLW4 131 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms