RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 FOXD4L4Q8WXT5 416 aaPredicted RBP7.05□□□□□ -1.28
VPS33A-203ENST00000536212 TRIM34Q9BYJ4 488 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 PANK2Q9BZ23 570 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 OSBPL3Q9H4L5 887 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 TOPAZ1Q8N9V7 1692 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 TNRQ92752 1358 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 ROBO2Q9HCK4 1378 aa7.05□□□□□ -1.28
VPS33A-203ENST00000536212 IBTKQ9P2D0 1353 aaPredicted RBP7.05□□□□□ -1.28
VPS33A-203ENST00000536212 DLG5Q8TDM6 1919 aa7.04□□□□□ -1.28
VPS33A-203ENST00000536212 SULT6B1Q6IMI4 303 aa7.04□□□□□ -1.28
VPS33A-203ENST00000536212 PLEKHG1Q9ULL1 1385 aa7.04□□□□□ -1.28
VPS33A-203ENST00000536212 NALCNQ8IZF0 1738 aa7.04□□□□□ -1.28
VPS33A-203ENST00000536212 TTC21AQ8NDW8 1320 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 HTATSF1O43719 755 aaKnown RBP7.03□□□□□ -1.28
VPS33A-203ENST00000536212 SDSP20132 328 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 SSFA2P28290 1259 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 NUCB2P80303 420 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 WASHC4Q2M389 1173 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 CYB5RLQ6IPT4 315 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 RNF19BQ6ZMZ0 732 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 GAS2L3Q86XJ1 694 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 C16orf71Q8IYS4 520 aaPredicted RBP7.03□□□□□ -1.28
VPS33A-203ENST00000536212 RETREG2Q8NC44 543 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 IL17RAQ96F46 866 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 CALR3Q96L12 384 aaKnown RBP7.03□□□□□ -1.28
VPS33A-203ENST00000536212 CWC22Q9HCG8 908 aaKnown RBP7.03□□□□□ -1.28
VPS33A-203ENST00000536212 ITSN1Q15811 1721 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 KDRP35968 1356 aa7.03□□□□□ -1.28
VPS33A-203ENST00000536212 ACEP12821 1306 aa7.02□□□□□ -1.28
VPS33A-203ENST00000536212 SOS1Q07889 1333 aaPredicted RBP7.02□□□□□ -1.28
VPS33A-203ENST00000536212 ERBB4Q15303 1308 aa7.02□□□□□ -1.28
VPS33A-203ENST00000536212 SALL3Q9BXA9 1300 aa7.02□□□□□ -1.28
VPS33A-203ENST00000536212 PTPRUQ92729 1446 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 PEAK1Q9H792 1746 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.02□□□□□ -1.29
VPS33A-203ENST00000536212 POM121CA8CG34 1229 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 BAG4O95429 457 aaKnown RBP7.02□□□□□ -1.29
VPS33A-203ENST00000536212 CCT4P50991 539 aaKnown RBP7.02□□□□□ -1.29
VPS33A-203ENST00000536212 ZNF445P59923 1031 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 PDE4CQ08493 712 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 IRF5Q13568 498 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 KRT24Q2M2I5 525 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 KLHL40Q2TBA0 621 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 TAF7LQ5H9L4 462 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 DESI1Q6ICB0 168 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 GLMNQ92990 594 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 PPP1R9BQ96SB3 815 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 MEIS3Q99687 375 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 MSH6P52701 1360 aa7.02□□□□□ -1.29
VPS33A-203ENST00000536212 IGSF1Q8N6C5 1336 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 SBNO1A3KN83 1393 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 GOLGA6L22H0YM25 854 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 HMMRO75330 724 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 REC8O95072 547 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 WNT7BP56706 349 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 HSP90AB2PQ58FF8 381 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
VPS33A-203ENST00000536212 CASC1Q6TDU7 716 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 MCM10Q7L590 875 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 TRIM46Q7Z4K8 759 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 OTUD7AQ8TE49 926 aaPredicted RBP7.01□□□□□ -1.29
VPS33A-203ENST00000536212 BABAM1Q9NWV8 329 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
VPS33A-203ENST00000536212 FLT4P35916 1363 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 ESPNB1AK53 854 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 ERC2O15083 957 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 EPB41L2O43491 1005 aaKnown RBP7□□□□□ -1.29
VPS33A-203ENST00000536212 GPR37L1O60883 481 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 HSP90AA1P07900 732 aaKnown RBP7□□□□□ -1.29
VPS33A-203ENST00000536212 VEGFBP49765 207 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 PDE1AP54750 535 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 SKOR1P84550 965 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 KCNMA1Q12791 1236 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 MLECQ14165 292 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 MTHFSDQ2M296 383 aaKnown RBP7□□□□□ -1.29
VPS33A-203ENST00000536212 EPS8L1Q8TE68 723 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 USB1Q9BQ65 265 aaKnown RBP7□□□□□ -1.29
VPS33A-203ENST00000536212 LMBRD1Q9NUN5 540 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 STAP2Q9UGK3 403 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 UBR1Q8IWV7 1749 aa7□□□□□ -1.29
VPS33A-203ENST00000536212 ARHGAP23Q9P227 1491 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 LRRC37A3O60309 1634 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 SMARCA5O60264 1052 aaPredicted RBP6.99□□□□□ -1.29
VPS33A-203ENST00000536212 DXOO77932 396 aaKnown RBP6.99□□□□□ -1.29
VPS33A-203ENST00000536212 GNAI2P04899 355 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 MCM2P49736 904 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 ATP8B2P98198 1209 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 CCDC173Q0VFZ6 552 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 CUL4AQ13619 759 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 NR6A1Q15406 480 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 LYPD8Q6UX82 237 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 G2E3Q7L622 706 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 PNMA1Q8ND90 353 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 TBX22Q9Y458 520 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 AOX1Q06278 1338 aa6.99□□□□□ -1.29
VPS33A-203ENST00000536212 SLIT1O75093 1534 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 ALDH1A1P00352 501 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 GNAI3P08754 354 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 BMP1P13497 986 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 LTKP29376 864 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms