RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LAMB4A4D0S4 1761 aa18.95■□□□□ 0.62
CHMP1A-202ENST00000535997 CHGBP05060 677 aa18.95■□□□□ 0.62
CHMP1A-202ENST00000535997 ZCRB1Q8TBF4 217 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-202ENST00000535997 DDX19AQ9NUU7 478 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-202ENST00000535997 PCDH11XQ9BZA7 1347 aa18.95■□□□□ 0.62
CHMP1A-202ENST00000535997 PCDH11YQ9BZA8 1340 aa18.95■□□□□ 0.62
CHMP1A-202ENST00000535997 TIMM10P62072 90 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 TTLL7Q6ZT98 887 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 FAM200AQ8TCP9 573 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 GOLIM4O00461 696 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 JAK2O60674 1132 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 TPM3P06753 285 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 HSP90B1P14625 803 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 FGD1P98174 961 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 SASS6Q6UVJ0 657 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 BRF1Q92994 677 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 TNMDQ9H2S6 317 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 DACT1Q9NYF0 836 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 CFAP45Q9UL16 551 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 GLI3P10071 1580 aa18.94■□□□□ 0.62
CHMP1A-202ENST00000535997 H3BQV1 296 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 EYA2O00167 538 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 PFKFB2O60825 505 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 CIAO1O76071 339 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 ZMYM1Q5SVZ6 1142 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 IFFO2Q5TF58 517 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 RBM43Q6ZSC3 357 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 SMARCC2Q8TAQ2 1214 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 UBE2Q2Q8WVN8 375 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 PARP4Q9UKK3 1724 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 NOLC1Q14978 699 aaKnown RBP eCLIP18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 ZNF830Q96NB3 372 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 AGXT2Q9BYV1 514 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 PDCL3Q9H2J4 239 aa18.93■□□□□ 0.62
CHMP1A-202ENST00000535997 PLCB2Q00722 1185 aa18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 TYRO3Q06418 890 aa18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 SCRN1Q12765 414 aa18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 RESTQ13127 1097 aa18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 CAMK4Q16566 473 aa18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 TTC12Q9H892 705 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 WDR17Q8IZU2 1322 aa18.92■□□□□ 0.62
CHMP1A-202ENST00000535997 A1BGP04217 495 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 EXOSC10Q01780 885 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 STOX1Q6ZVD7 989 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 MRVI1Q9Y6F6 885 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 AP5Z1O43299 807 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 UQCRHP07919 91 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 MPNDQ8N594 471 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 CHMP4CQ96CF2 233 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 KIF3AQ9Y496 699 aa18.91■□□□□ 0.62
CHMP1A-202ENST00000535997 HMGN5P82970 282 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 NAA16Q6N069 864 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 CLSTN2Q9H4D0 955 aa18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 DYNC1I1O14576 645 aa18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 RNF113AO15541 343 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 IFIT1P09914 478 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 HSPD1P10809 573 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 PGBD1Q96JS3 809 aa18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 CCDC9Q9Y3X0 531 aaKnown RBP18.9■□□□□ 0.62
CHMP1A-202ENST00000535997 A0A1B0GUL7 405 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 LRRC24Q50LG9 513 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 TOM1L2Q6ZVM7 507 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 DDX11Q96FC9 970 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 LRRC2Q9BYS8 371 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 SPTLC3Q9NUV7 552 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 FBXO3Q9UK99 471 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 NSUN7Q8NE18 718 aaKnown RBP18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 ZBTB3Q9H5J0 574 aa18.89■□□□□ 0.61
CHMP1A-202ENST00000535997 CAVIN2O95810 425 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 GLIPR1L2Q4G1C9 344 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 DNTTIP2Q5QJE6 756 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 CKAP2LQ8IYA6 745 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 CEP126Q9P2H0 1117 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 E7EWF7 191 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 NR1I2O75469 434 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 ATL3Q6DD88 541 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 FBXL16Q8N461 479 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 BICD2Q8TD16 824 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 ZNF274Q96GC6 653 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 PRDM11Q9NQV5 511 aa18.88■□□□□ 0.61
CHMP1A-202ENST00000535997 NUP188Q5SRE5 1749 aa18.87■□□□□ 0.61
CHMP1A-202ENST00000535997 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
CHMP1A-202ENST00000535997 UBR2Q8IWV8 1755 aa18.87■□□□□ 0.61
CHMP1A-202ENST00000535997 PRIMPOLQ96LW4 560 aa18.87■□□□□ 0.61
CHMP1A-202ENST00000535997 ISCA1Q9BUE6 129 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 RCOR1Q9UKL0 485 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 MAST3O60307 1309 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 CTDNEP1O95476 244 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 ADD1P35611 737 aaKnown RBP18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 APOBRQ0VD83 1088 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 TRIM28Q13263 835 aaKnown RBP18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 CCDC57Q2TAC2 916 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 SLFNL1Q499Z3 407 aa18.86■□□□□ 0.61
CHMP1A-202ENST00000535997 ANO6Q4KMQ2 910 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms