RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
COL21A1-212ENST00000535941 APBB1O00213 710 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 ADRA2BP18089 450 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 NECTIN1Q15223 517 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 SLC27A3Q5K4L6 730 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 GPATCH3Q96I76 525 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 IRS4O14654 1257 aaPredicted RBP9.72□□□□□ -0.85
COL21A1-212ENST00000535941 CASC1Q6TDU7 716 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 DBNDD2Q9BQY9 259 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 PALD1Q9ULE6 856 aa9.72□□□□□ -0.85
COL21A1-212ENST00000535941 HIP1O00291 1037 aa9.71□□□□□ -0.85
COL21A1-212ENST00000535941 CYP2E1P05181 493 aaPredicted RBP9.71□□□□□ -0.85
COL21A1-212ENST00000535941 IFIT2P09913 472 aaKnown RBP9.71□□□□□ -0.85
COL21A1-212ENST00000535941 FBXO41Q8TF61 875 aa9.71□□□□□ -0.85
COL21A1-212ENST00000535941 MAP4K1Q92918 833 aa9.71□□□□□ -0.85
COL21A1-212ENST00000535941 ZNF804BA4D1E1 1349 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 MROH5Q6ZUA9 1318 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 ZNF594Q96JF6 807 aaPredicted RBP9.71□□□□□ -0.86
COL21A1-212ENST00000535941 NAV1Q8NEY1 1877 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 FOXP2O15409 715 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 ITGA6P23229 1130 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 CUL4AQ13619 759 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 NFKBIBQ15653 356 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 UTP14AQ9BVJ6 771 aaKnown RBP9.71□□□□□ -0.86
COL21A1-212ENST00000535941 TBC1D2BQ9UPU7 963 aa9.71□□□□□ -0.86
COL21A1-212ENST00000535941 HSP90AA1P07900 732 aaKnown RBP9.7□□□□□ -0.86
COL21A1-212ENST00000535941 TM4SF1P30408 202 aa9.7□□□□□ -0.86
COL21A1-212ENST00000535941 BECN1Q14457 450 aa9.7□□□□□ -0.86
COL21A1-212ENST00000535941 TM6SF1Q9BZW5 370 aa9.7□□□□□ -0.86
COL21A1-212ENST00000535941 CCDC8Q9H0W5 538 aaPredicted RBP9.7□□□□□ -0.86
COL21A1-212ENST00000535941 PDS5AQ29RF7 1337 aaKnown RBP9.7□□□□□ -0.86
COL21A1-212ENST00000535941 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
COL21A1-212ENST00000535941 SIL1Q9H173 461 aa9.7□□□□□ -0.86
COL21A1-212ENST00000535941 CCDC171Q6TFL3 1326 aa9.7□□□□□ -0.86
COL21A1-212ENST00000535941 SNED1Q8TER0 1413 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 A0A0D9SFI3 127 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 A0A1B0GUL7 405 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 KLRG2A4D1S0 409 aaPredicted RBP9.69□□□□□ -0.86
COL21A1-212ENST00000535941 PROM2Q8N271 834 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 KBTBD3Q8NAB2 608 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 K7ELQ4 463 aaPredicted RBP9.69□□□□□ -0.86
COL21A1-212ENST00000535941 TBC1D9BQ66K14 1250 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 QTRT2Q9H974 415 aaKnown RBP9.69□□□□□ -0.86
COL21A1-212ENST00000535941 RGS17Q9UGC6 210 aaPredicted RBP9.69□□□□□ -0.86
COL21A1-212ENST00000535941 PLSCR1O15162 318 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 FAM196AQ6ZSG2 479 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 AKT1S1Q96B36 256 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
COL21A1-212ENST00000535941 AKAP2Q9Y2D5 859 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
COL21A1-212ENST00000535941 ZMYM6O95789 1325 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 PDE8BO95263 885 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 PTH1RQ03431 593 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 NMIQ13287 307 aaPredicted RBP9.68□□□□□ -0.86
COL21A1-212ENST00000535941 IFIT5Q13325 482 aaKnown RBP9.68□□□□□ -0.86
COL21A1-212ENST00000535941 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 CARMIL3Q8ND23 1372 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 FBXL16Q8N461 479 aa9.68□□□□□ -0.86
COL21A1-212ENST00000535941 TRMT112Q9UI30 125 aaKnown RBP9.68□□□□□ -0.86
COL21A1-212ENST00000535941 GREB1LQ9C091 1923 aaPredicted RBP9.68□□□□□ -0.86
COL21A1-212ENST00000535941 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 ANKRD18BA2A2Z9 1011 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 TAF5LO75529 589 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 CCDC57Q2TAC2 916 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 GPTP24298 496 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 SSFA2P28290 1259 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 ADORA1P30542 326 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 SLC4A3P48751 1232 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 CRY2Q49AN0 593 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 ZNF589Q86UQ0 364 aaPredicted RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 ARHGEF1Q92888 912 aaKnown RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 XAGE2Q96GT9 111 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 FAM227BQ96M60 508 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 CCNL1Q9UK58 526 aaPredicted RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 CCDC9Q9Y3X0 531 aaKnown RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 RRP9O43818 475 aaKnown RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 OS9Q13438 667 aaPredicted RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 ZNF772Q68DY9 489 aaPredicted RBP9.67□□□□□ -0.86
COL21A1-212ENST00000535941 KRT27Q7Z3Y8 459 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 RILPL2Q969X0 211 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
COL21A1-212ENST00000535941 MAP4K4O95819 1239 aaPredicted RBP9.66□□□□□ -0.86
COL21A1-212ENST00000535941 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
COL21A1-212ENST00000535941 TRIM6-TRIM34B2RNG4 842 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 ERFEQ4G0M1 354 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 PAG1Q9NWQ8 432 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 MCAMP43121 646 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 SCARF1Q14162 830 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 RUFY2Q8WXA3 655 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 AGXT2Q9BYV1 514 aa9.66□□□□□ -0.86
COL21A1-212ENST00000535941 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
COL21A1-212ENST00000535941 NIP7Q9Y221 180 aaKnown RBP eCLIP9.66□□□□□ -0.86
COL21A1-212ENST00000535941 TIMM10P62072 90 aa9.65□□□□□ -0.86
COL21A1-212ENST00000535941 PUM3Q15397 648 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms