RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 USP44Q9H0E7 712 aa27.42■■□□□ 1.98
SSPN-204ENST00000535504 FZD9O00144 591 aa27.41■■□□□ 1.98
SSPN-204ENST00000535504 GNAI3P08754 354 aa27.41■■□□□ 1.98
SSPN-204ENST00000535504 TRIM27P14373 513 aa27.41■■□□□ 1.98
SSPN-204ENST00000535504 KCNJ4P48050 445 aa27.41■■□□□ 1.98
SSPN-204ENST00000535504 RRAGCQ9HB90 399 aa27.41■■□□□ 1.98
SSPN-204ENST00000535504 NMRK2Q9NPI5 230 aa27.41■■□□□ 1.98
SSPN-204ENST00000535504 SPEF2Q9C093 1822 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 IQCA1LA6NCM1 817 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 MS4A1P11836 297 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 VEGFAP15692 232 aaPredicted RBP27.4■■□□□ 1.98
SSPN-204ENST00000535504 INTS3Q68E01 1043 aaKnown RBP27.4■■□□□ 1.98
SSPN-204ENST00000535504 SLC51AQ86UW1 340 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 TBC1D16Q8TBP0 767 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 CLUAP1Q96AJ1 413 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 BICC1Q9H694 974 aaKnown RBP27.4■■□□□ 1.98
SSPN-204ENST00000535504 CNNM1Q9NRU3 951 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 ZNRF3Q9ULT6 936 aa27.4■■□□□ 1.98
SSPN-204ENST00000535504 RIMBP2O15034 1052 aa27.39■■□□□ 1.98
SSPN-204ENST00000535504 EPHA10Q5JZY3 1008 aa27.39■■□□□ 1.98
SSPN-204ENST00000535504 YTHDC1Q96MU7 727 aaKnown RBP27.39■■□□□ 1.98
SSPN-204ENST00000535504 MINPP1Q9UNW1 487 aa27.39■■□□□ 1.98
SSPN-204ENST00000535504 DDNO94850 711 aaPredicted RBP27.38■■□□□ 1.97
SSPN-204ENST00000535504 LDHAL6AQ6ZMR3 332 aa27.38■■□□□ 1.97
SSPN-204ENST00000535504 GPC2Q8N158 579 aa27.38■■□□□ 1.97
SSPN-204ENST00000535504 POLLQ9UGP5 575 aa27.38■■□□□ 1.97
SSPN-204ENST00000535504 GJA3Q9Y6H8 435 aa27.38■■□□□ 1.97
SSPN-204ENST00000535504 LMOD1P29536 600 aaPredicted RBP27.37■■□□□ 1.97
SSPN-204ENST00000535504 LEMD3Q9Y2U8 911 aa27.37■■□□□ 1.97
SSPN-204ENST00000535504 TNIP1Q15025 636 aa27.36■■□□□ 1.97
SSPN-204ENST00000535504 DZIP1LQ8IYY4 767 aaKnown RBP27.36■■□□□ 1.97
SSPN-204ENST00000535504 ZNF541Q9H0D2 1346 aa27.36■■□□□ 1.97
SSPN-204ENST00000535504 RABL6Q3YEC7 729 aaPredicted RBP27.35■■□□□ 1.97
SSPN-204ENST00000535504 RCAN3Q9UKA8 241 aa27.35■■□□□ 1.97
SSPN-204ENST00000535504 COL4A1P02462 1669 aa27.34■■□□□ 1.97
SSPN-204ENST00000535504 KIF3CO14782 793 aa27.34■■□□□ 1.97
SSPN-204ENST00000535504 CHRNDQ07001 517 aa27.34■■□□□ 1.97
SSPN-204ENST00000535504 CIAPIN1Q6FI81 312 aa27.34■■□□□ 1.97
SSPN-204ENST00000535504 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.34■■□□□ 1.97
SSPN-204ENST00000535504 WDR90Q96KV7 1748 aa27.33■■□□□ 1.97
SSPN-204ENST00000535504 TOMM70O94826 608 aa27.33■■□□□ 1.97
SSPN-204ENST00000535504 DUOX1Q9NRD9 1551 aa27.33■■□□□ 1.97
SSPN-204ENST00000535504 KAZALD1Q96I82 304 aa27.32■■□□□ 1.96
SSPN-204ENST00000535504 L3MBTL3Q96JM7 780 aaPredicted RBP27.32■■□□□ 1.96
SSPN-204ENST00000535504 DBNDD1Q9H9R9 158 aa27.32■■□□□ 1.96
SSPN-204ENST00000535504 ECE2O60344 883 aa27.31■■□□□ 1.96
SSPN-204ENST00000535504 ITPRIPQ8IWB1 547 aa27.31■■□□□ 1.96
SSPN-204ENST00000535504 ANKRD44Q8N8A2 993 aa27.31■■□□□ 1.96
SSPN-204ENST00000535504 ZNF594Q96JF6 807 aaPredicted RBP27.31■■□□□ 1.96
SSPN-204ENST00000535504 MEIS3Q99687 375 aa27.31■■□□□ 1.96
SSPN-204ENST00000535504 HACL1Q9UJ83 578 aa27.31■■□□□ 1.96
SSPN-204ENST00000535504 LRRFIP2Q9Y608 721 aaKnown RBP27.31■■□□□ 1.96
SSPN-204ENST00000535504 ZNF804BA4D1E1 1349 aa27.31■■□□□ 1.96
SSPN-204ENST00000535504 C1QTNF8P60827 252 aa27.3■■□□□ 1.96
SSPN-204ENST00000535504 TMEM57Q8N5G2 664 aa27.3■■□□□ 1.96
SSPN-204ENST00000535504 MROH5Q6ZUA9 1318 aa27.3■■□□□ 1.96
SSPN-204ENST00000535504 MED23Q9ULK4 1368 aa27.3■■□□□ 1.96
SSPN-204ENST00000535504 LTBP1Q14766 1721 aa27.3■■□□□ 1.96
SSPN-204ENST00000535504 PLIN1O60240 522 aa27.29■■□□□ 1.96
SSPN-204ENST00000535504 DOK7Q18PE1 504 aa27.29■■□□□ 1.96
SSPN-204ENST00000535504 GPR101Q96P66 508 aaPredicted RBP27.29■■□□□ 1.96
SSPN-204ENST00000535504 RAD17O75943 681 aa27.28■■□□□ 1.96
SSPN-204ENST00000535504 GNAI2P04899 355 aa27.28■■□□□ 1.96
SSPN-204ENST00000535504 CXCL9Q07325 125 aa27.28■■□□□ 1.96
SSPN-204ENST00000535504 RBM46Q8TBY0 533 aaKnown RBP27.28■■□□□ 1.96
SSPN-204ENST00000535504 SCN4AP35499 1836 aa27.27■■□□□ 1.96
SSPN-204ENST00000535504 COL4A5P29400 1685 aa27.27■■□□□ 1.96
SSPN-204ENST00000535504 PODNQ7Z5L7 613 aa27.26■■□□□ 1.95
SSPN-204ENST00000535504 PNMA8AQ86V59 439 aaPredicted RBP27.26■■□□□ 1.95
SSPN-204ENST00000535504 SMC1BQ8NDV3 1235 aa27.26■■□□□ 1.95
SSPN-204ENST00000535504 CHMP4BQ9H444 224 aaKnown RBP27.26■■□□□ 1.95
SSPN-204ENST00000535504 TNNQ9UQP3 1299 aa27.26■■□□□ 1.95
SSPN-204ENST00000535504 TAF5LO75529 589 aa27.25■■□□□ 1.95
SSPN-204ENST00000535504 METTL24Q5JXM2 366 aa27.25■■□□□ 1.95
SSPN-204ENST00000535504 HELBQ8NG08 1087 aaPredicted RBP27.25■■□□□ 1.95
SSPN-204ENST00000535504 COA1Q9GZY4 146 aa27.25■■□□□ 1.95
SSPN-204ENST00000535504 EPHX2P34913 555 aa27.24■■□□□ 1.95
SSPN-204ENST00000535504 FSTL1Q12841 308 aa27.23■■□□□ 1.95
SSPN-204ENST00000535504 EAPPQ56P03 285 aaPredicted RBP27.23■■□□□ 1.95
SSPN-204ENST00000535504 ZNF804AQ7Z570 1209 aa27.23■■□□□ 1.95
SSPN-204ENST00000535504 TAF1DQ9H5J8 278 aaPredicted RBP27.23■■□□□ 1.95
SSPN-204ENST00000535504 FBXO3Q9UK99 471 aa27.23■■□□□ 1.95
SSPN-204ENST00000535504 YDJCA8MPS7 323 aa27.22■■□□□ 1.95
SSPN-204ENST00000535504 RPS12P25398 132 aaKnown RBP27.22■■□□□ 1.95
SSPN-204ENST00000535504 UBE4AQ14139 1066 aa27.22■■□□□ 1.95
SSPN-204ENST00000535504 CLEC11AQ9Y240 323 aa27.22■■□□□ 1.95
SSPN-204ENST00000535504 PSMD14O00487 310 aa27.21■■□□□ 1.95
SSPN-204ENST00000535504 FBXW7Q969H0 707 aa27.21■■□□□ 1.95
SSPN-204ENST00000535504 POTECB2RU33 542 aa27.2■■□□□ 1.94
SSPN-204ENST00000535504 H7C1D1 291 aa27.2■■□□□ 1.94
SSPN-204ENST00000535504 EYA2O00167 538 aa27.2■■□□□ 1.94
SSPN-204ENST00000535504 SRGAP3O43295 1099 aa27.2■■□□□ 1.94
SSPN-204ENST00000535504 GMPSP49915 693 aaPredicted RBP27.2■■□□□ 1.94
SSPN-204ENST00000535504 PUS3Q9BZE2 481 aaKnown RBP27.2■■□□□ 1.94
SSPN-204ENST00000535504 RIPOR2Q9Y4F9 1068 aa27.2■■□□□ 1.94
SSPN-204ENST00000535504 USP17L3A6NCW0 530 aa27.19■■□□□ 1.94
SSPN-204ENST00000535504 USP17L4A6NCW7 530 aa27.19■■□□□ 1.94
SSPN-204ENST00000535504 USP17L1Q7RTZ2 530 aa27.19■■□□□ 1.94
SSPN-204ENST00000535504 LDHDQ86WU2 507 aa27.19■■□□□ 1.94
SSPN-204ENST00000535504 VPS37DQ86XT2 251 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms