RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TBC1D16Q8TBP0 767 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 CCDC85AQ96PX6 553 aaPredicted RBP16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 XDHP47989 1333 aa16.94■□□□□ 0.3
CLSTN3-205ENST00000535452 PSMD14O00487 310 aa16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 ATP2B4P23634 1241 aa16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 LBX1P52954 281 aa16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 CYP4F22Q6NT55 531 aa16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 GLIS2Q9BZE0 524 aaPredicted RBP16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
CLSTN3-205ENST00000535452 PI4KAP2A4QPH2 592 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 KRT26Q7Z3Y9 468 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 PI4KAP1Q8N8J0 262 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 C2orf69Q8N8R5 385 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 POLLQ9UGP5 575 aa16.92■□□□□ 0.3
CLSTN3-205ENST00000535452 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 SLC51AQ86UW1 340 aa16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 TSR2Q969E8 191 aaKnown RBP16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 IL16Q14005 1332 aa16.91■□□□□ 0.3
CLSTN3-205ENST00000535452 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 KCNJ4P48050 445 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 CTSWP56202 376 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 SAPCD2Q86UD0 394 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 OGFOD1Q8N543 542 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 SEC31BQ9NQW1 1179 aa16.9■□□□□ 0.3
CLSTN3-205ENST00000535452 HUNKP57058 714 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 NOGQ13253 232 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 CST9Q5W186 159 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 PODNQ7Z5L7 613 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 TRPM4Q8TD43 1214 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 FBXW7Q969H0 707 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 LTBP1Q14766 1721 aa16.89■□□□□ 0.29
CLSTN3-205ENST00000535452 LRRC37AA6NMS7 1700 aa16.88■□□□□ 0.29
CLSTN3-205ENST00000535452 JARID2Q92833 1246 aaPredicted RBP16.88■□□□□ 0.29
CLSTN3-205ENST00000535452 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
CLSTN3-205ENST00000535452 TRPM7Q96QT4 1865 aa16.87■□□□□ 0.29
CLSTN3-205ENST00000535452 FMR1Q06787 632 aaKnown RBP eCLIP16.87■□□□□ 0.29
CLSTN3-205ENST00000535452 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
CLSTN3-205ENST00000535452 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
CLSTN3-205ENST00000535452 USP17L3A6NCW0 530 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 USP17L4A6NCW7 530 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 VIL1P09327 827 aaKnown RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 FLIIQ13045 1269 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 RSBN1LQ6PCB5 846 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 USP17L1Q7RTZ2 530 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 UBE3BQ7Z3V4 1068 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 WDR63Q8IWG1 891 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 GBA2Q9HCG7 927 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 SALL2Q9Y467 1007 aaPredicted RBP16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
CLSTN3-205ENST00000535452 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 NF2P35240 595 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 GGA3Q9NZ52 723 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 LEMD3Q9Y2U8 911 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 CHMP3Q9Y3E7 222 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
CLSTN3-205ENST00000535452 ZNF316A6NFI3 1004 aaPredicted RBP16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 MMP14P50281 582 aa16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 RGMBQ6NW40 437 aa16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 TTLL11Q8NHH1 800 aa16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 GREM2Q9H772 168 aa16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 TAF1P21675 1872 aa16.84■□□□□ 0.29
CLSTN3-205ENST00000535452 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
CLSTN3-205ENST00000535452 AOC2O75106 756 aa16.83■□□□□ 0.28
CLSTN3-205ENST00000535452 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
CLSTN3-205ENST00000535452 ZNF157P51786 506 aaPredicted RBP16.83■□□□□ 0.28
CLSTN3-205ENST00000535452 COA1Q9GZY4 146 aa16.83■□□□□ 0.28
CLSTN3-205ENST00000535452 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
CLSTN3-205ENST00000535452 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 SHTN1A0MZ66 631 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 ITGA6P23229 1130 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 SCARF1Q14162 830 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 TTLL12Q14166 644 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 GCKRQ14397 625 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms