RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
KNTC1-208ENST00000535410 ITGBL1O95965 494 aaPredicted RBP15.07■□□□□ 0
KNTC1-208ENST00000535410 GMPSP49915 693 aaPredicted RBP15.07■□□□□ 0
KNTC1-208ENST00000535410 SLC51AQ86UW1 340 aa15.07■□□□□ 0
KNTC1-208ENST00000535410 ZC3H15Q8WU90 426 aaKnown RBP15.07■□□□□ 0
KNTC1-208ENST00000535410 MPHOSPH8Q99549 860 aa15.07■□□□□ 0
KNTC1-208ENST00000535410 ZNF521Q96K83 1311 aa15.07■□□□□ 0
KNTC1-208ENST00000535410 PASKQ96RG2 1323 aa15.07■□□□□ 0
KNTC1-208ENST00000535410 DDX60Q8IY21 1712 aaKnown RBP15.06■□□□□ 0
KNTC1-208ENST00000535410 LAMB2P55268 1798 aa15.06■□□□□ 0
KNTC1-208ENST00000535410 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
KNTC1-208ENST00000535410 ANKRD2Q9GZV1 360 aa15.06■□□□□ 0
KNTC1-208ENST00000535410 GREM2Q9H772 168 aa15.06■□□□□ 0
KNTC1-208ENST00000535410 DBNDD1Q9H9R9 158 aa15.06■□□□□ 0
KNTC1-208ENST00000535410 CNOT7Q9UIV1 285 aaKnown RBP15.06■□□□□ 0
KNTC1-208ENST00000535410 CACNA1FO60840 1977 aa15.05■□□□□ 0
KNTC1-208ENST00000535410 ANKRD18BA2A2Z9 1011 aa15.05■□□□□ -0
KNTC1-208ENST00000535410 ECE2O60344 883 aa15.05■□□□□ -0
KNTC1-208ENST00000535410 ALDH1L1O75891 902 aa15.05■□□□□ -0
KNTC1-208ENST00000535410 CSF1RP07333 972 aa15.05■□□□□ -0
KNTC1-208ENST00000535410 BEND3Q5T5X7 828 aa15.05■□□□□ -0
KNTC1-208ENST00000535410 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
KNTC1-208ENST00000535410 COL4A5P29400 1685 aa15.05■□□□□ -0
KNTC1-208ENST00000535410 YDJCA8MPS7 323 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 ITGA6P23229 1130 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 IFIT5Q13325 482 aaKnown RBP15.04■□□□□ -0
KNTC1-208ENST00000535410 DOK7Q18PE1 504 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 PODNQ7Z5L7 613 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 SRCIN1Q9C0H9 1055 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 MINPP1Q9UNW1 487 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 LEMD3Q9Y2U8 911 aa15.04■□□□□ -0
KNTC1-208ENST00000535410 F6X3S4 739 aa15.03■□□□□ -0
KNTC1-208ENST00000535410 PSMD14O00487 310 aa15.03■□□□□ -0
KNTC1-208ENST00000535410 SLFN5Q08AF3 891 aa15.03■□□□□ -0
KNTC1-208ENST00000535410 SLC4A10Q6U841 1118 aa15.03■□□□□ -0
KNTC1-208ENST00000535410 PTPRCP08575 1304 aa15.02■□□□□ -0
KNTC1-208ENST00000535410 GRM8O00222 908 aa15.02■□□□□ -0
KNTC1-208ENST00000535410 VIL1P09327 827 aaKnown RBP15.02■□□□□ -0
KNTC1-208ENST00000535410 CT47B1P0C2W7 299 aaPredicted RBP15.02■□□□□ -0
KNTC1-208ENST00000535410 CASP7P55210 303 aa15.02■□□□□ -0
KNTC1-208ENST00000535410 CCDC57Q2TAC2 916 aa15.02■□□□□ -0
KNTC1-208ENST00000535410 MICALL2Q8IY33 904 aa15.02■□□□□ -0
KNTC1-208ENST00000535410 PGAP2Q9UHJ9 254 aa15.02■□□□□ -0
KNTC1-208ENST00000535410 LRRC37AA6NMS7 1700 aa15.02□□□□□ -0.01
KNTC1-208ENST00000535410 KCNJ4P48050 445 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 MMP14P50281 582 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 CCT4P50991 539 aaKnown RBP15.01□□□□□ -0.01
KNTC1-208ENST00000535410 ALDH1L2Q3SY69 923 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 CDC37L1Q7L3B6 337 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 AGBL3Q8NEM8 1001 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 MKRN1Q9UHC7 482 aaKnown RBP15.01□□□□□ -0.01
KNTC1-208ENST00000535410 ABT1Q9ULW3 272 aaKnown RBP15.01□□□□□ -0.01
KNTC1-208ENST00000535410 CHMP3Q9Y3E7 222 aa15.01□□□□□ -0.01
KNTC1-208ENST00000535410 DEFB115Q30KQ5 88 aa15□□□□□ -0.01
KNTC1-208ENST00000535410 FAM161AQ3B820 660 aa15□□□□□ -0.01
KNTC1-208ENST00000535410 COA1Q9GZY4 146 aa15□□□□□ -0.01
KNTC1-208ENST00000535410 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
KNTC1-208ENST00000535410 TAF1P21675 1872 aa14.99□□□□□ -0.01
KNTC1-208ENST00000535410 MED23Q9ULK4 1368 aa14.99□□□□□ -0.01
KNTC1-208ENST00000535410 DUOX1Q9NRD9 1551 aa14.99□□□□□ -0.01
KNTC1-208ENST00000535410 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
KNTC1-208ENST00000535410 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
KNTC1-208ENST00000535410 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
KNTC1-208ENST00000535410 MRPL50Q8N5N7 158 aaKnown RBP14.99□□□□□ -0.01
KNTC1-208ENST00000535410 GPR101Q96P66 508 aaPredicted RBP14.99□□□□□ -0.01
KNTC1-208ENST00000535410 CNTNAP1P78357 1384 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 ZNF804BA4D1E1 1349 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 ECE1P42892 770 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 FOXO4P98177 505 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 RSBN1LQ6PCB5 846 aaPredicted RBP14.98□□□□□ -0.01
KNTC1-208ENST00000535410 LMBR1LQ6UX01 489 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 OGFOD1Q8N543 542 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 DCPSQ96C86 337 aaKnown RBP14.98□□□□□ -0.01
KNTC1-208ENST00000535410 HDAC5Q9UQL6 1122 aa14.98□□□□□ -0.01
KNTC1-208ENST00000535410 MYO3BQ8WXR4 1341 aa14.97□□□□□ -0.01
KNTC1-208ENST00000535410 RASSF10A6NK89 507 aa14.97□□□□□ -0.01
KNTC1-208ENST00000535410 LDHAL6AQ6ZMR3 332 aa14.97□□□□□ -0.01
KNTC1-208ENST00000535410 KCNQ5Q9NR82 932 aa14.97□□□□□ -0.01
KNTC1-208ENST00000535410 ADAMTSL1Q8N6G6 1762 aa14.97□□□□□ -0.01
KNTC1-208ENST00000535410 USP17L8P0C7I0 530 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 HIRAP54198 1017 aaPredicted RBP14.96□□□□□ -0.01
KNTC1-208ENST00000535410 CHRNDQ07001 517 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 KIF4BQ2VIQ3 1234 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 TBC1D10BQ4KMP7 808 aaPredicted RBP14.96□□□□□ -0.01
KNTC1-208ENST00000535410 RBM26Q5T8P6 1007 aaKnown RBP14.96□□□□□ -0.01
KNTC1-208ENST00000535410 STRIP1Q5VSL9 837 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 SAMD7Q7Z3H4 446 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
KNTC1-208ENST00000535410 SSH1Q8WYL5 1049 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 AIDAQ96BJ3 306 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 CNNM1Q9NRU3 951 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
KNTC1-208ENST00000535410 CELF2O95319 508 aaKnown RBP14.95□□□□□ -0.02
KNTC1-208ENST00000535410 VEGFBP49765 207 aa14.95□□□□□ -0.02
KNTC1-208ENST00000535410 ZNF280AP59817 542 aaPredicted RBP14.95□□□□□ -0.02
KNTC1-208ENST00000535410 SULF1Q8IWU6 871 aa14.95□□□□□ -0.02
KNTC1-208ENST00000535410 TRPM4Q8TD43 1214 aa14.95□□□□□ -0.02
KNTC1-208ENST00000535410 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
KNTC1-208ENST00000535410 UTYO14607 1347 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms