RNA–Protein interactions for RNA: ENST00000535291.5

MMP17-206, Transcript of matrix metallopeptidase 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP17, Length 2,301 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-206ENST00000535291 IMPACTQ9P2X3 320 aa20.23■□□□□ 0.83
MMP17-206ENST00000535291 ARMCX5Q6P1M9 558 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 Q6ZUG5 572 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.22■□□□□ 0.838e-8■■□□□ 13.5
MMP17-206ENST00000535291 FAM160A1Q05DH4 1040 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 SCRN1Q12765 414 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 ARHGAP29Q52LW3 1261 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 USP28Q96RU2 1077 aa20.22■□□□□ 0.83
MMP17-206ENST00000535291 KCNQ3O43525 872 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 FOSBP53539 338 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 HNRNPH2P55795 449 aaKnown RBP20.21■□□□□ 0.83
MMP17-206ENST00000535291 SMARCC2Q8TAQ2 1214 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 NEK1Q96PY6 1258 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.21■□□□□ 0.83
MMP17-206ENST00000535291 COL15A1P39059 1388 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 MYH15Q9Y2K3 1946 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 PSDA5PKW4 1024 aaPredicted RBP20.21■□□□□ 0.83
MMP17-206ENST00000535291 HSP90B1P14625 803 aaKnown RBP20.21■□□□□ 0.83
MMP17-206ENST00000535291 HOXC9P31274 260 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
MMP17-206ENST00000535291 SLC20A2Q08357 652 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
MMP17-206ENST00000535291 CEMIPQ8WUJ3 1361 aa20.2■□□□□ 0.82
MMP17-206ENST00000535291 ZRANB2O95218 330 aaKnown RBP eCLIP20.2■□□□□ 0.82
MMP17-206ENST00000535291 HOXB7P09629 217 aa20.2■□□□□ 0.82
MMP17-206ENST00000535291 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
MMP17-206ENST00000535291 KRT32Q14532 448 aa20.2■□□□□ 0.82
MMP17-206ENST00000535291 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
MMP17-206ENST00000535291 FSIP1Q8NA03 581 aa20.2■□□□□ 0.82
MMP17-206ENST00000535291 XPO4Q9C0E2 1151 aaKnown RBP20.2■□□□□ 0.82
MMP17-206ENST00000535291 NAT10Q9H0A0 1025 aaKnown RBP20.2■□□□□ 0.82
MMP17-206ENST00000535291 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
MMP17-206ENST00000535291 MAP3K2Q9Y2U5 619 aa20.2■□□□□ 0.82
MMP17-206ENST00000535291 TMC6Q7Z403 805 aa20.19■□□□□ 0.82
MMP17-206ENST00000535291 EDC3Q96F86 508 aaKnown RBP20.19■□□□□ 0.82
MMP17-206ENST00000535291 LRRC2Q9BYS8 371 aa20.19■□□□□ 0.82
MMP17-206ENST00000535291 NAA16Q6N069 864 aaPredicted RBP20.19■□□□□ 0.82
MMP17-206ENST00000535291 CCDC150Q8NCX0 1101 aa20.19■□□□□ 0.82
MMP17-206ENST00000535291 LTV1Q96GA3 475 aaPredicted RBP20.19■□□□□ 0.82
MMP17-206ENST00000535291 DNAJC2Q99543 621 aaKnown RBP20.19■□□□□ 0.82
MMP17-206ENST00000535291 LGR6Q9HBX8 967 aa20.19■□□□□ 0.82
MMP17-206ENST00000535291 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
MMP17-206ENST00000535291 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
MMP17-206ENST00000535291 USHBP1Q8N6Y0 703 aa20.18■□□□□ 0.82
MMP17-206ENST00000535291 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
MMP17-206ENST00000535291 KAZALD1Q96I82 304 aa20.18■□□□□ 0.82
MMP17-206ENST00000535291 SFPQP23246 707 aaKnown RBP eCLIP20.18■□□□□ 0.82
MMP17-206ENST00000535291 KCNJ6P48051 423 aa20.18■□□□□ 0.82
MMP17-206ENST00000535291 IFNKQ9P0W0 207 aa20.18■□□□□ 0.82
MMP17-206ENST00000535291 SMC2O95347 1197 aa20.17■□□□□ 0.82
MMP17-206ENST00000535291 CTDNEP1O95476 244 aa20.17■□□□□ 0.82
MMP17-206ENST00000535291 ME1P48163 572 aa20.17■□□□□ 0.82
MMP17-206ENST00000535291 DPCR1Q3MIW9 517 aa20.17■□□□□ 0.82
MMP17-206ENST00000535291 FMR1NBQ8N0W7 255 aaPredicted RBP20.17■□□□□ 0.82
MMP17-206ENST00000535291 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
MMP17-206ENST00000535291 TRERF1Q96PN7 1200 aa20.17■□□□□ 0.82
MMP17-206ENST00000535291 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
MMP17-206ENST00000535291 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
MMP17-206ENST00000535291 LLPHQ9BRT6 129 aaKnown RBP20.16■□□□□ 0.82
MMP17-206ENST00000535291 SIL1Q9H173 461 aa20.16■□□□□ 0.82
MMP17-206ENST00000535291 PFKFB2O60825 505 aa20.16■□□□□ 0.82
MMP17-206ENST00000535291 ILDR1Q86SU0 546 aaPredicted RBP20.16■□□□□ 0.82
MMP17-206ENST00000535291 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
MMP17-206ENST00000535291 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
MMP17-206ENST00000535291 CYP21A2P08686 494 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
MMP17-206ENST00000535291 PTPDC1A2A3K4 754 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 TUBB4AP04350 444 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 CHGBP05060 677 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 ETF1P62495 437 aaKnown RBP20.15■□□□□ 0.82
MMP17-206ENST00000535291 PDE4CQ08493 712 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 TMCO3Q6UWJ1 677 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 ZNF396Q96N95 335 aaPredicted RBP20.15■□□□□ 0.82
MMP17-206ENST00000535291 PCDHA7Q9UN72 937 aa20.15■□□□□ 0.82
MMP17-206ENST00000535291 FANCGO15287 622 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 NLRP6P59044 892 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 ATL3Q6DD88 541 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 CCDC129Q6ZRS4 1044 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 HOMER1Q86YM7 354 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 NGDNQ8NEJ9 315 aaKnown RBP20.14■□□□□ 0.82
MMP17-206ENST00000535291 UBXN4Q92575 508 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 SDF4Q9BRK5 362 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 DNAI1Q9UI46 699 aa20.14■□□□□ 0.82
MMP17-206ENST00000535291 A0A1B0GVL5 298 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 POLR3GO15318 223 aaPredicted RBP20.14■□□□□ 0.81
MMP17-206ENST00000535291 KSR2Q6VAB6 950 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 KDM3BQ7LBC6 1761 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 UBR1Q8IWV7 1749 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 MRPS27Q92552 414 aaKnown RBP20.14■□□□□ 0.81
MMP17-206ENST00000535291 SEC62Q99442 399 aaKnown RBP20.14■□□□□ 0.81
MMP17-206ENST00000535291 BPIFA3Q9BQP9 254 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 ARGLU1Q9NWB6 273 aaPredicted RBP20.14■□□□□ 0.81
MMP17-206ENST00000535291 KIAA1468Q9P260 1216 aa20.14■□□□□ 0.81
MMP17-206ENST00000535291 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.81
MMP17-206ENST00000535291 NEDD4P46934 1319 aa20.13■□□□□ 0.81
MMP17-206ENST00000535291 PHLPP2Q6ZVD8 1323 aa20.13■□□□□ 0.81
MMP17-206ENST00000535291 NEK11Q8NG66 645 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms