RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-205ENST00000535177 ZBTB40Q9NUA8 1239 aa17.91■□□□□ 0.46
CYB561A3-205ENST00000535177 ZNF541Q9H0D2 1346 aa17.91■□□□□ 0.46
CYB561A3-205ENST00000535177 COL4A5P29400 1685 aa17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 CSF1RP07333 972 aa17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 ALDH1B1P30837 517 aa17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 CCDC85AQ96PX6 553 aaPredicted RBP17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 GREM2Q9H772 168 aa17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 CHMP3Q9Y3E7 222 aa17.9■□□□□ 0.46
CYB561A3-205ENST00000535177 HOXA10P31260 410 aaPredicted RBP17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 DDX46Q7L014 1031 aaKnown RBP17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 RBM17Q96I25 401 aaKnown RBP17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 TAF1DQ9H5J8 278 aaPredicted RBP17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 COL4A1P02462 1669 aa17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 ADAMTSL1Q8N6G6 1762 aa17.89■□□□□ 0.45
CYB561A3-205ENST00000535177 FZD9O00144 591 aa17.88■□□□□ 0.45
CYB561A3-205ENST00000535177 PASKQ96RG2 1323 aa17.88■□□□□ 0.45
CYB561A3-205ENST00000535177 ITGBL1O95965 494 aaPredicted RBP17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 ITGA6P23229 1130 aa17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 MTX1Q13505 466 aa17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
CYB561A3-205ENST00000535177 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 NEFLP07196 543 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 GRAPQ13588 217 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 AAMPQ13685 434 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 CCDC57Q2TAC2 916 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 PSMD1Q99460 953 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 SEC31BQ9NQW1 1179 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 CREBZFQ9NS37 354 aa17.86■□□□□ 0.45
CYB561A3-205ENST00000535177 IQCA1LA6NCM1 817 aa17.85■□□□□ 0.45
CYB561A3-205ENST00000535177 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
CYB561A3-205ENST00000535177 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
CYB561A3-205ENST00000535177 SPEF2Q9C093 1822 aa17.85■□□□□ 0.45
CYB561A3-205ENST00000535177 LRRC37AA6NMS7 1700 aa17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 LTBP1Q14766 1721 aa17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 HSPA1AP0DMV8 641 aaKnown RBP17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 HSPA1BP0DMV9 641 aaKnown RBP17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 TAF7LQ5H9L4 462 aa17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 LDHDQ86WU2 507 aa17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 CELF1Q92879 486 aaKnown RBP17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 TAF1P21675 1872 aa17.84■□□□□ 0.45
CYB561A3-205ENST00000535177 PNMA6EA0A0J9YXQ4 647 aa17.83■□□□□ 0.44
CYB561A3-205ENST00000535177 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
CYB561A3-205ENST00000535177 ANKRD18AQ8IVF6 992 aa17.83■□□□□ 0.44
CYB561A3-205ENST00000535177 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.44
CYB561A3-205ENST00000535177 EPHX2P34913 555 aa17.82■□□□□ 0.44
CYB561A3-205ENST00000535177 IGHMBP2P38935 993 aaKnown RBP17.82■□□□□ 0.44
CYB561A3-205ENST00000535177 ATP8B2P98198 1209 aa17.82■□□□□ 0.44
CYB561A3-205ENST00000535177 RPAP2Q8IXW5 612 aaPredicted RBP17.82■□□□□ 0.44
CYB561A3-205ENST00000535177 HACL1Q9UJ83 578 aa17.82■□□□□ 0.44
CYB561A3-205ENST00000535177 BBOX1O75936 387 aa17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 RFX5P48382 616 aaPredicted RBP17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 RPS8P62241 208 aaKnown RBP17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 TMC4Q7Z404 712 aa17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 GPC2Q8N158 579 aa17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 SSH3Q8TE77 659 aa17.81■□□□□ 0.44
CYB561A3-205ENST00000535177 HMMRO75330 724 aa17.8■□□□□ 0.44
CYB561A3-205ENST00000535177 POLA2Q14181 598 aa17.8■□□□□ 0.44
CYB561A3-205ENST00000535177 EAPPQ56P03 285 aaPredicted RBP17.8■□□□□ 0.44
CYB561A3-205ENST00000535177 ZNF594Q96JF6 807 aaPredicted RBP17.8■□□□□ 0.44
CYB561A3-205ENST00000535177 MPHOSPH8Q99549 860 aa17.8■□□□□ 0.44
CYB561A3-205ENST00000535177 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
CYB561A3-205ENST00000535177 SIRT2Q8IXJ6 389 aa17.79■□□□□ 0.44
CYB561A3-205ENST00000535177 KLHDC4Q8TBB5 520 aa17.79■□□□□ 0.44
CYB561A3-205ENST00000535177 BSDC1Q9NW68 430 aaPredicted RBP17.79■□□□□ 0.44
CYB561A3-205ENST00000535177 PCDHB15Q9Y5E8 787 aa17.79■□□□□ 0.44
CYB561A3-205ENST00000535177 CNTNAP1P78357 1384 aa17.79■□□□□ 0.44
CYB561A3-205ENST00000535177 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 JDP2Q8WYK2 163 aa17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 COPRSQ9NQ92 184 aa17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 PA2G4Q9UQ80 394 aaKnown RBP17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 A0A1B0GUL6 1792 aa17.78■□□□□ 0.44
CYB561A3-205ENST00000535177 SCNN1DP51172 638 aa17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 SIL1Q9H173 461 aa17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
CYB561A3-205ENST00000535177 TMEM88BA6NKF7 163 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 CIAO1O76071 339 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 EPS15P42566 896 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 SP8Q8IXZ3 490 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 LARGE2Q8N3Y3 721 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 PUS3Q9BZE2 481 aaKnown RBP17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
CYB561A3-205ENST00000535177 EYA2O00167 538 aa17.75■□□□□ 0.43
CYB561A3-205ENST00000535177 VEGFBP49765 207 aa17.75■□□□□ 0.43
CYB561A3-205ENST00000535177 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms