RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ANKRD18AQ8IVF6 992 aa24.11■■□□□ 1.45
NDUFS3-213ENST00000534716 ZC3H12CQ9C0D7 883 aaKnown RBP24.11■■□□□ 1.45
NDUFS3-213ENST00000534716 ECE2O60344 883 aa24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 RPS12P25398 132 aaKnown RBP24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 HIRAP54198 1017 aaPredicted RBP24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 DEFB115Q30KQ5 88 aa24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 CDC5LQ99459 802 aaKnown RBP24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 ANKIB1Q9P2G1 1089 aa24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 GGA1Q9UJY5 639 aa24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 SALL2Q9Y467 1007 aaPredicted RBP24.1■■□□□ 1.45
NDUFS3-213ENST00000534716 EXOSC9Q06265 439 aaKnown RBP24.09■■□□□ 1.45
NDUFS3-213ENST00000534716 CST9Q5W186 159 aa24.09■■□□□ 1.45
NDUFS3-213ENST00000534716 CCDC85AQ96PX6 553 aaPredicted RBP24.09■■□□□ 1.45
NDUFS3-213ENST00000534716 PLA2G12BQ9BX93 195 aa24.09■■□□□ 1.45
NDUFS3-213ENST00000534716 XDHP47989 1333 aa24.09■■□□□ 1.45
NDUFS3-213ENST00000534716 H7C1D1 291 aa24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 UFL1O94874 794 aa24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 GCKRQ14397 625 aa24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 DOK7Q18PE1 504 aa24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 MICALL2Q8IY33 904 aa24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 DNAAF4Q8WXU2 420 aa24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 SPINK5Q9NQ38 1064 aaPredicted RBP24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 BSDC1Q9NW68 430 aaPredicted RBP24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 ZBTB12Q9Y330 459 aaPredicted RBP24.08■■□□□ 1.45
NDUFS3-213ENST00000534716 TRAF5O00463 557 aa24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 VIL1P09327 827 aaKnown RBP24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 FMR1Q06787 632 aaKnown RBP eCLIP24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 FKBP5Q13451 457 aaPredicted RBP24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 LINS1Q8NG48 757 aa24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 TRPM4Q8TD43 1214 aa24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 GPR101Q96P66 508 aaPredicted RBP24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 MYH16Q9H6N6 1097 aa24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 GREM2Q9H772 168 aa24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 KCNQ5Q9NR82 932 aa24.07■■□□□ 1.44
NDUFS3-213ENST00000534716 CASP7P55210 303 aa24.06■■□□□ 1.44
NDUFS3-213ENST00000534716 UBE3BQ7Z3V4 1068 aa24.06■■□□□ 1.44
NDUFS3-213ENST00000534716 ABT1Q9ULW3 272 aaKnown RBP24.06■■□□□ 1.44
NDUFS3-213ENST00000534716 ZNF609O15014 1411 aa24.05■■□□□ 1.44
NDUFS3-213ENST00000534716 SHTN1A0MZ66 631 aa24.05■■□□□ 1.44
NDUFS3-213ENST00000534716 ATP2B4P23634 1241 aa24.05■■□□□ 1.44
NDUFS3-213ENST00000534716 FAM9BQ8IZU0 186 aa24.05■■□□□ 1.44
NDUFS3-213ENST00000534716 MINPP1Q9UNW1 487 aa24.05■■□□□ 1.44
NDUFS3-213ENST00000534716 CSF1RP07333 972 aa24.04■■□□□ 1.44
NDUFS3-213ENST00000534716 CDC37L1Q7L3B6 337 aa24.04■■□□□ 1.44
NDUFS3-213ENST00000534716 TLL2Q9Y6L7 1015 aa24.04■■□□□ 1.44
NDUFS3-213ENST00000534716 WDR33Q9C0J8 1336 aaKnown RBP24.04■■□□□ 1.44
NDUFS3-213ENST00000534716 GLIS2Q9BZE0 524 aaPredicted RBP24.03■■□□□ 1.44
NDUFS3-213ENST00000534716 WBP1LQ9NX94 342 aa24.03■■□□□ 1.44
NDUFS3-213ENST00000534716 ZNF521Q96K83 1311 aa24.02■■□□□ 1.44
NDUFS3-213ENST00000534716 CACNA1FO60840 1977 aa24.02■■□□□ 1.43
NDUFS3-213ENST00000534716 G3V3G9 751 aa24.01■■□□□ 1.43
NDUFS3-213ENST00000534716 DCAF8Q5TAQ9 597 aa24.01■■□□□ 1.43
NDUFS3-213ENST00000534716 SAMD7Q7Z3H4 446 aa24.01■■□□□ 1.43
NDUFS3-213ENST00000534716 PODNQ7Z5L7 613 aa24.01■■□□□ 1.43
NDUFS3-213ENST00000534716 FOXN1O15353 648 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 CELF2O95319 508 aaKnown RBP24■■□□□ 1.43
NDUFS3-213ENST00000534716 BEND3Q5T5X7 828 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 SAPCD2Q86UD0 394 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 AGBL3Q8NEM8 1001 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 HHIPL1Q96JK4 782 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 MED23Q9ULK4 1368 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 TRPM7Q96QT4 1865 aa24■■□□□ 1.43
NDUFS3-213ENST00000534716 EGFRP00533 1210 aa23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 ITGA6P23229 1130 aa23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 IGHMBP2P38935 993 aaKnown RBP23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 ECE1P42892 770 aa23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 TBC1D10BQ4KMP7 808 aaPredicted RBP23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 RSBN1LQ6PCB5 846 aaPredicted RBP23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 MYH3P11055 1940 aa23.99■■□□□ 1.43
NDUFS3-213ENST00000534716 CCT4P50991 539 aaKnown RBP23.98■■□□□ 1.43
NDUFS3-213ENST00000534716 ZNF280AP59817 542 aaPredicted RBP23.98■■□□□ 1.43
NDUFS3-213ENST00000534716 MAP2K1Q02750 393 aaPredicted RBP23.98■■□□□ 1.43
NDUFS3-213ENST00000534716 AIDAQ96BJ3 306 aa23.98■■□□□ 1.43
NDUFS3-213ENST00000534716 LEMD3Q9Y2U8 911 aa23.98■■□□□ 1.43
NDUFS3-213ENST00000534716 THSD7BQ9C0I4 1608 aa23.98■■□□□ 1.43
NDUFS3-213ENST00000534716 WTIPA6NIX2 430 aaPredicted RBP23.97■■□□□ 1.43
NDUFS3-213ENST00000534716 SCN9AQ15858 1988 aa23.97■■□□□ 1.43
NDUFS3-213ENST00000534716 CAPNS2Q96L46 248 aa23.97■■□□□ 1.43
NDUFS3-213ENST00000534716 GMLQ99445 158 aa23.97■■□□□ 1.43
NDUFS3-213ENST00000534716 PRDM10Q9NQV6 1147 aa23.97■■□□□ 1.43
NDUFS3-213ENST00000534716 USP17L3A6NCW0 530 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 USP17L4A6NCW7 530 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 F6X3S4 739 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 CTCFP49711 727 aaPredicted RBP23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 FAM161AQ3B820 660 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 USP17L1Q7RTZ2 530 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 USP48Q86UV5 1035 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 ANKRD2Q9GZV1 360 aa23.96■■□□□ 1.43
NDUFS3-213ENST00000534716 FOXO4P98177 505 aa23.95■■□□□ 1.42
NDUFS3-213ENST00000534716 KIF4BQ2VIQ3 1234 aa23.95■■□□□ 1.42
NDUFS3-213ENST00000534716 CYP4F22Q6NT55 531 aa23.95■■□□□ 1.42
NDUFS3-213ENST00000534716 MAP2K2P36507 400 aa23.94■■□□□ 1.42
NDUFS3-213ENST00000534716 KRT26Q7Z3Y9 468 aa23.94■■□□□ 1.42
NDUFS3-213ENST00000534716 DCPSQ96C86 337 aaKnown RBP23.94■■□□□ 1.42
NDUFS3-213ENST00000534716 MPHOSPH8Q99549 860 aa23.94■■□□□ 1.42
NDUFS3-213ENST00000534716 COA1Q9GZY4 146 aa23.94■■□□□ 1.42
NDUFS3-213ENST00000534716 PSME4Q14997 1843 aa23.93■■□□□ 1.42
NDUFS3-213ENST00000534716 ZNF804BA4D1E1 1349 aa23.92■■□□□ 1.42
NDUFS3-213ENST00000534716 ANKRD18BA2A2Z9 1011 aa23.92■■□□□ 1.42
NDUFS3-213ENST00000534716 RBM26Q5T8P6 1007 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms