RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 LARGE2Q8N3Y3 721 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 JDP2Q8WYK2 163 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 RPGRQ92834 1020 aaKnown RBP9.46□□□□□ -0.9
GEN1-207ENST00000534669 CAPNS2Q96L46 248 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.9
GEN1-207ENST00000534669 DDX60Q8IY21 1712 aaKnown RBP9.45□□□□□ -0.9
GEN1-207ENST00000534669 POLR2AP24928 1970 aaKnown RBP9.45□□□□□ -0.9
GEN1-207ENST00000534669 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 SHTN1A0MZ66 631 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 PDIA6Q15084 440 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 DLK2Q6UY11 383 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 CRAMP1Q96RY5 1269 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 NYXQ9GZU5 481 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 ABCC4O15439 1325 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 LRRC37AA6NMS7 1700 aa9.45□□□□□ -0.9
GEN1-207ENST00000534669 PPIP5K2O43314 1243 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
GEN1-207ENST00000534669 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
GEN1-207ENST00000534669 FOXK1P85037 733 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 MAP2K1Q02750 393 aaPredicted RBP9.44□□□□□ -0.9
GEN1-207ENST00000534669 CXCL9Q07325 125 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 GIGYF2Q6Y7W6 1299 aaKnown RBP9.44□□□□□ -0.9
GEN1-207ENST00000534669 KIF6Q6ZMV9 814 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
GEN1-207ENST00000534669 ZNF428Q96B54 188 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 GLIS2Q9BZE0 524 aaPredicted RBP9.44□□□□□ -0.9
GEN1-207ENST00000534669 GPRC5DQ9NZD1 345 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 TLL2Q9Y6L7 1015 aa9.44□□□□□ -0.9
GEN1-207ENST00000534669 GMPSP49915 693 aaPredicted RBP9.43□□□□□ -0.9
GEN1-207ENST00000534669 NFE2L2Q16236 605 aa9.43□□□□□ -0.9
GEN1-207ENST00000534669 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
GEN1-207ENST00000534669 USP50Q70EL3 339 aaPredicted RBP9.43□□□□□ -0.9
GEN1-207ENST00000534669 NIM1KQ8IY84 436 aa9.43□□□□□ -0.9
GEN1-207ENST00000534669 TRPM4Q8TD43 1214 aa9.43□□□□□ -0.9
GEN1-207ENST00000534669 RBM17Q96I25 401 aaKnown RBP9.43□□□□□ -0.9
GEN1-207ENST00000534669 GPR101Q96P66 508 aaPredicted RBP9.43□□□□□ -0.9
GEN1-207ENST00000534669 ZIC5Q96T25 663 aa9.43□□□□□ -0.9
GEN1-207ENST00000534669 YDJCA8MPS7 323 aa9.42□□□□□ -0.9
GEN1-207ENST00000534669 HCLS1P14317 486 aaPredicted RBP9.42□□□□□ -0.9
GEN1-207ENST00000534669 SLC10A5Q5PT55 438 aa9.42□□□□□ -0.9
GEN1-207ENST00000534669 SAPCD2Q86UD0 394 aa9.42□□□□□ -0.9
GEN1-207ENST00000534669 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
GEN1-207ENST00000534669 RTFDC1Q9BY42 306 aaPredicted RBP9.42□□□□□ -0.9
GEN1-207ENST00000534669 RTN4Q9NQC3 1192 aaKnown RBP9.42□□□□□ -0.9
GEN1-207ENST00000534669 ADARB2Q9NS39 739 aaKnown RBP9.42□□□□□ -0.9
GEN1-207ENST00000534669 ATP6V0A2Q9Y487 856 aa9.42□□□□□ -0.9
GEN1-207ENST00000534669 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
GEN1-207ENST00000534669 CCDC85CA6NKD9 419 aa9.41□□□□□ -0.9
GEN1-207ENST00000534669 RAD17O75943 681 aa9.41□□□□□ -0.9
GEN1-207ENST00000534669 CELF2O95319 508 aaKnown RBP9.41□□□□□ -0.9
GEN1-207ENST00000534669 EIF2S2P20042 333 aaKnown RBP9.41□□□□□ -0.9
GEN1-207ENST00000534669 KRT24Q2M2I5 525 aa9.41□□□□□ -0.9
GEN1-207ENST00000534669 ZNRF3Q9ULT6 936 aa9.41□□□□□ -0.9
GEN1-207ENST00000534669 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 EGFRP00533 1210 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 ECE1P42892 770 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 PARP10Q53GL7 1025 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 PPP1R42Q7Z4L9 355 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 NLRP10Q86W26 655 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 NECTIN2Q92692 538 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 NLRP3Q96P20 1036 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
GEN1-207ENST00000534669 CRISPLD2Q9H0B8 497 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 PGAP2Q9UHJ9 254 aa9.4□□□□□ -0.9
GEN1-207ENST00000534669 KIAA2012Q0VF49 1180 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
GEN1-207ENST00000534669 DPP8Q6V1X1 898 aaPredicted RBP9.39□□□□□ -0.91
GEN1-207ENST00000534669 SP8Q8IXZ3 490 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 MPNDQ8N594 471 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 XAGE3Q8WTP9 111 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 MCOLN1Q9GZU1 580 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
GEN1-207ENST00000534669 TNRC18O15417 2968 aaPredicted RBP9.38□□□□□ -0.91
GEN1-207ENST00000534669 MAP2K2P36507 400 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 RGS19P49795 217 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
GEN1-207ENST00000534669 DSG2Q14126 1118 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 CIAPIN1Q6FI81 312 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 COPS6Q7L5N1 327 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 PTCD2Q8WV60 388 aaKnown RBP9.38□□□□□ -0.91
GEN1-207ENST00000534669 BBXQ8WY36 941 aaPredicted RBP9.38□□□□□ -0.91
GEN1-207ENST00000534669 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 KCNQ5Q9NR82 932 aa9.38□□□□□ -0.91
GEN1-207ENST00000534669 ASTN2O75129 1339 aaPredicted RBP9.37□□□□□ -0.91
GEN1-207ENST00000534669 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
GEN1-207ENST00000534669 GRAPQ13588 217 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 USP48Q86UV5 1035 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 SUPT20HQ8NEM7 779 aa9.37□□□□□ -0.91
GEN1-207ENST00000534669 GRAPLQ8TC17 118 aaPredicted RBP9.37□□□□□ -0.91
GEN1-207ENST00000534669 CELF1Q92879 486 aaKnown RBP9.37□□□□□ -0.91
GEN1-207ENST00000534669 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.911e-6■■□□□ 11.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms