RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 ITGA6P23229 1130 aa19.53■□□□□ 0.72
UBXN1-217ENST00000534176 RPS12P25398 132 aaKnown RBP19.53■□□□□ 0.72
UBXN1-217ENST00000534176 CXCL9Q07325 125 aa19.53■□□□□ 0.72
UBXN1-217ENST00000534176 IFIT5Q13325 482 aaKnown RBP19.53■□□□□ 0.72
UBXN1-217ENST00000534176 SSH1Q8WYL5 1049 aa19.53■□□□□ 0.72
UBXN1-217ENST00000534176 JARID2Q92833 1246 aaPredicted RBP19.53■□□□□ 0.72
UBXN1-217ENST00000534176 POLLQ9UGP5 575 aa19.53■□□□□ 0.72
UBXN1-217ENST00000534176 COL4A5P29400 1685 aa19.52■□□□□ 0.72
UBXN1-217ENST00000534176 UFL1O94874 794 aa19.52■□□□□ 0.72
UBXN1-217ENST00000534176 CCDC85AQ96PX6 553 aaPredicted RBP19.52■□□□□ 0.72
UBXN1-217ENST00000534176 SMC4Q9NTJ3 1288 aa19.52■□□□□ 0.72
UBXN1-217ENST00000534176 HDAC5Q9UQL6 1122 aa19.52■□□□□ 0.72
UBXN1-217ENST00000534176 LEMD3Q9Y2U8 911 aa19.52■□□□□ 0.72
UBXN1-217ENST00000534176 SCNN1DP51172 638 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 EAPPQ56P03 285 aaPredicted RBP19.51■□□□□ 0.71
UBXN1-217ENST00000534176 MIER1Q8N108 512 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 DPF2Q92785 391 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 CDCA7LQ96GN5 454 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 BCL2L13Q9BXK5 485 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 ADARB2Q9NS39 739 aaKnown RBP19.51■□□□□ 0.71
UBXN1-217ENST00000534176 GPRC5DQ9NZD1 345 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 MINPP1Q9UNW1 487 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 UTYO14607 1347 aa19.51■□□□□ 0.71
UBXN1-217ENST00000534176 PODNQ7Z5L7 613 aa19.5■□□□□ 0.71
UBXN1-217ENST00000534176 KIF16BQ96L93 1317 aa19.5■□□□□ 0.71
UBXN1-217ENST00000534176 MED23Q9ULK4 1368 aa19.49■□□□□ 0.71
UBXN1-217ENST00000534176 ECE2O60344 883 aa19.49■□□□□ 0.71
UBXN1-217ENST00000534176 API5Q9BZZ5 524 aaKnown RBP19.49■□□□□ 0.71
UBXN1-217ENST00000534176 CLEC11AQ9Y240 323 aa19.49■□□□□ 0.71
UBXN1-217ENST00000534176 H7C1D1 291 aa19.48■□□□□ 0.71
UBXN1-217ENST00000534176 RIMBP2O15034 1052 aa19.48■□□□□ 0.71
UBXN1-217ENST00000534176 MMP14P50281 582 aa19.48■□□□□ 0.71
UBXN1-217ENST00000534176 CCT4P50991 539 aaKnown RBP19.48■□□□□ 0.71
UBXN1-217ENST00000534176 FOXO4P98177 505 aa19.48■□□□□ 0.71
UBXN1-217ENST00000534176 FAM161AQ3B820 660 aa19.48■□□□□ 0.71
UBXN1-217ENST00000534176 ZC3H15Q8WU90 426 aaKnown RBP19.48■□□□□ 0.71
UBXN1-217ENST00000534176 ARHGAP45Q92619 1136 aa19.48■□□□□ 0.71
UBXN1-217ENST00000534176 RAD17O75943 681 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 TAF7LQ5H9L4 462 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 SLC51AQ86UW1 340 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 DBNDD1Q9H9R9 158 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 CHMP3Q9Y3E7 222 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 ZNF609O15014 1411 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 ADAMTSL1Q8N6G6 1762 aa19.47■□□□□ 0.71
UBXN1-217ENST00000534176 YDJCA8MPS7 323 aa19.46■□□□□ 0.71
UBXN1-217ENST00000534176 IPO8O15397 1037 aaKnown RBP19.46■□□□□ 0.71
UBXN1-217ENST00000534176 GMPSP49915 693 aaPredicted RBP19.46■□□□□ 0.71
UBXN1-217ENST00000534176 LMBR1LQ6UX01 489 aa19.46■□□□□ 0.71
UBXN1-217ENST00000534176 CREBZFQ9NS37 354 aa19.46■□□□□ 0.71
UBXN1-217ENST00000534176 EPS15P42566 896 aa19.45■□□□□ 0.7
UBXN1-217ENST00000534176 KCNJ4P48050 445 aa19.45■□□□□ 0.7
UBXN1-217ENST00000534176 HNRNPUQ00839 825 aaKnown RBP eCLIP19.45■□□□□ 0.7
UBXN1-217ENST00000534176 AGBL3Q8NEM8 1001 aa19.45■□□□□ 0.7
UBXN1-217ENST00000534176 COA1Q9GZY4 146 aa19.45■□□□□ 0.7
UBXN1-217ENST00000534176 COL4A1P02462 1669 aa19.45■□□□□ 0.7
UBXN1-217ENST00000534176 PSMD14O00487 310 aa19.44■□□□□ 0.7
UBXN1-217ENST00000534176 VIL1P09327 827 aaKnown RBP19.44■□□□□ 0.7
UBXN1-217ENST00000534176 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
UBXN1-217ENST00000534176 CNOT7Q9UIV1 285 aaKnown RBP19.44■□□□□ 0.7
UBXN1-217ENST00000534176 ZNF804BA4D1E1 1349 aa19.44■□□□□ 0.7
UBXN1-217ENST00000534176 MYO3BQ8WXR4 1341 aa19.44■□□□□ 0.7
UBXN1-217ENST00000534176 PASKQ96RG2 1323 aa19.44■□□□□ 0.7
UBXN1-217ENST00000534176 POTEIP0CG38 1075 aa19.43■□□□□ 0.7
UBXN1-217ENST00000534176 POTEJP0CG39 1038 aa19.43■□□□□ 0.7
UBXN1-217ENST00000534176 RARSP54136 660 aaKnown RBP19.43■□□□□ 0.7
UBXN1-217ENST00000534176 DOK7Q18PE1 504 aa19.43■□□□□ 0.7
UBXN1-217ENST00000534176 RABL6Q3YEC7 729 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-217ENST00000534176 LDHAL6AQ6ZMR3 332 aa19.43■□□□□ 0.7
UBXN1-217ENST00000534176 KLRG1Q96E93 195 aa19.43■□□□□ 0.7
UBXN1-217ENST00000534176 ITGBL1O95965 494 aaPredicted RBP19.42■□□□□ 0.7
UBXN1-217ENST00000534176 NBPF7P0C2Y1 421 aaPredicted RBP19.42■□□□□ 0.7
UBXN1-217ENST00000534176 CHRNDQ07001 517 aa19.42■□□□□ 0.7
UBXN1-217ENST00000534176 C15orf52Q6ZUT6 534 aaKnown RBP19.42■□□□□ 0.7
UBXN1-217ENST00000534176 DNAJC5GQ8N7S2 189 aa19.42■□□□□ 0.7
UBXN1-217ENST00000534176 CNNM1Q9NRU3 951 aa19.42■□□□□ 0.7
UBXN1-217ENST00000534176 PGAP2Q9UHJ9 254 aa19.42■□□□□ 0.7
UBXN1-217ENST00000534176 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
UBXN1-217ENST00000534176 USP17L3A6NCW0 530 aa19.41■□□□□ 0.7
UBXN1-217ENST00000534176 USP17L4A6NCW7 530 aa19.41■□□□□ 0.7
UBXN1-217ENST00000534176 TMEM88BA6NKF7 163 aa19.41■□□□□ 0.7
UBXN1-217ENST00000534176 USP17L1Q7RTZ2 530 aa19.41■□□□□ 0.7
UBXN1-217ENST00000534176 MICALL2Q8IY33 904 aa19.41■□□□□ 0.7
UBXN1-217ENST00000534176 NOB1Q9ULX3 412 aaKnown RBP19.41■□□□□ 0.7
UBXN1-217ENST00000534176 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
UBXN1-217ENST00000534176 SPEF2Q9C093 1822 aa19.4■□□□□ 0.7
UBXN1-217ENST00000534176 STRIP1Q5VSL9 837 aa19.4■□□□□ 0.7
UBXN1-217ENST00000534176 RSBN1LQ6PCB5 846 aaPredicted RBP19.4■□□□□ 0.7
UBXN1-217ENST00000534176 SUCLG2Q96I99 432 aa19.4■□□□□ 0.7
UBXN1-217ENST00000534176 USP44Q9H0E7 712 aa19.4■□□□□ 0.7
UBXN1-217ENST00000534176 MROH5Q6ZUA9 1318 aa19.39■□□□□ 0.69
UBXN1-217ENST00000534176 PSME4Q14997 1843 aa19.39■□□□□ 0.69
UBXN1-217ENST00000534176 UBTFL1P0CB47 393 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-217ENST00000534176 EPHA10Q5JZY3 1008 aa19.38■□□□□ 0.69
UBXN1-217ENST00000534176 MAP1SQ66K74 1059 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-217ENST00000534176 ZNF804AQ7Z570 1209 aa19.38■□□□□ 0.69
UBXN1-217ENST00000534176 OGFOD1Q8N543 542 aa19.38■□□□□ 0.69
UBXN1-217ENST00000534176 BICC1Q9H694 974 aaKnown RBP19.38■□□□□ 0.69
UBXN1-217ENST00000534176 UBE4AQ14139 1066 aa19.37■□□□□ 0.69
UBXN1-217ENST00000534176 CDC37L1Q7L3B6 337 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms