RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 VPS72Q15906 364 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 TMEM259Q4ZIN3 620 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 FKBPLQ9UIM3 349 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 USP21Q9UK80 565 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 WNK3Q9BYP7 1800 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 OVOS2A0A0G2JMS6 1433 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 DISP2A7MBM2 1401 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 IL16Q14005 1332 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 SPATA31A1Q5TZJ5 1347 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 SPATA31A5Q5VU36 1347 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 SPATA31A7Q8IWB4 1347 aa8□□□□□ -1.13
CMTM1-220ENST00000534143 GNAT3A8MTJ3 354 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 ATRNO75882 1429 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 USP17L8P0C7I0 530 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 GLI3P10071 1580 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 AKAP4Q5JQC9 854 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 DUSP27Q5VZP5 1158 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 PDXDC2PQ6P474 469 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 C1QTNF2Q9BXJ5 285 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 SHANK3Q9BYB0 1731 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 SPG7Q9UQ90 795 aa7.99□□□□□ -1.13
CMTM1-220ENST00000534143 THRAP3Q9Y2W1 955 aaKnown RBP7.99□□□□□ -1.13
CMTM1-220ENST00000534143 ADAMTS7Q9UKP4 1686 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 MAP3K5Q99683 1374 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 E9PSI1 815 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 ZNF853P0CG23 659 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 DCTN1Q14203 1278 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 ZNF530Q6P9A1 599 aaPredicted RBP7.98□□□□□ -1.13
CMTM1-220ENST00000534143 ZCRB1Q8TBF4 217 aaKnown RBP7.98□□□□□ -1.13
CMTM1-220ENST00000534143 THUMPD2Q9BTF0 503 aaKnown RBP7.98□□□□□ -1.13
CMTM1-220ENST00000534143 ATP13A2Q9NQ11 1180 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 USP35Q9P2H5 1018 aa7.98□□□□□ -1.13
CMTM1-220ENST00000534143 GMPR2Q9P2T1 348 aaKnown RBP7.98□□□□□ -1.13
CMTM1-220ENST00000534143 ZC3H4Q9UPT8 1303 aaKnown RBP7.98□□□□□ -1.13
CMTM1-220ENST00000534143 SCN11AQ9UI33 1791 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 LRRC37A3O60309 1634 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 CYP27B1O15528 508 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 ADH1CP00326 375 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 PHKG2P15735 406 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 CALD1Q05682 793 aaKnown RBP7.97□□□□□ -1.13
CMTM1-220ENST00000534143 NNTQ13423 1086 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 MCM10Q7L590 875 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 IFNL2Q8IZJ0 200 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 EPS8L1Q8TE68 723 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 CDCA7Q9BWT1 371 aaPredicted RBP7.97□□□□□ -1.13
CMTM1-220ENST00000534143 LGR6Q9HBX8 967 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 HMX1Q9NP08 348 aaPredicted RBP7.97□□□□□ -1.13
CMTM1-220ENST00000534143 TRPC5Q9UL62 973 aaPredicted RBP7.97□□□□□ -1.13
CMTM1-220ENST00000534143 CEMIPQ8WUJ3 1361 aa7.97□□□□□ -1.13
CMTM1-220ENST00000534143 CHL1O00533 1208 aa7.96□□□□□ -1.14
CMTM1-220ENST00000534143 RNMTO43148 476 aaKnown RBP7.96□□□□□ -1.14
CMTM1-220ENST00000534143 GRM5P41594 1212 aa7.96□□□□□ -1.14
CMTM1-220ENST00000534143 ARID5BQ14865 1188 aa7.96□□□□□ -1.14
CMTM1-220ENST00000534143 C1orf141Q5JVX7 400 aa7.96□□□□□ -1.14
CMTM1-220ENST00000534143 TRMT44Q8IYL2 757 aaKnown RBP7.96□□□□□ -1.14
CMTM1-220ENST00000534143 RTF1Q92541 710 aaKnown RBP7.96□□□□□ -1.14
CMTM1-220ENST00000534143 IFT57Q9NWB7 429 aa7.96□□□□□ -1.14
CMTM1-220ENST00000534143 SIPA1L3O60292 1781 aaPredicted RBP7.96□□□□□ -1.14
CMTM1-220ENST00000534143 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
CMTM1-220ENST00000534143 MAGEB6P1A0A0J9YX57 407 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 CAPN5O15484 640 aaPredicted RBP7.95□□□□□ -1.14
CMTM1-220ENST00000534143 GNAI1P63096 354 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 NR5A1Q13285 461 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 MPRIPQ6WCQ1 1025 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 GJD4Q96KN9 370 aaPredicted RBP7.95□□□□□ -1.14
CMTM1-220ENST00000534143 ARHGAP9Q9BRR9 750 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 MYH16Q9H6N6 1097 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 CCDC9Q9Y3X0 531 aaKnown RBP7.95□□□□□ -1.14
CMTM1-220ENST00000534143 MAP4K5Q9Y4K4 846 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 PCDH11XQ9BZA7 1347 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 PCDH11YQ9BZA8 1340 aa7.95□□□□□ -1.14
CMTM1-220ENST00000534143 EXOC5O00471 708 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 HSP90AB1P08238 724 aaKnown RBP7.94□□□□□ -1.14
CMTM1-220ENST00000534143 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-220ENST00000534143 PNMA1Q8ND90 353 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 DCAF5Q96JK2 942 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 ANP32EQ9BTT0 268 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 KLF16Q9BXK1 252 aaPredicted RBP7.94□□□□□ -1.14
CMTM1-220ENST00000534143 MBIPQ9NS73 344 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 BABAM1Q9NWV8 329 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 GPSM3Q9Y4H4 160 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 THSD7AQ9UPZ6 1657 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 FANCIQ9NVI1 1328 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 TNS2Q63HR2 1409 aa7.94□□□□□ -1.14
CMTM1-220ENST00000534143 PTK2Q05397 1052 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 DDB1Q16531 1140 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 ERICH6Q7L0X2 663 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 DDX54Q8TDD1 881 aaKnown RBP7.93□□□□□ -1.14
CMTM1-220ENST00000534143 TSR2Q969E8 191 aaKnown RBP7.93□□□□□ -1.14
CMTM1-220ENST00000534143 ZNF775Q96BV0 537 aaPredicted RBP7.93□□□□□ -1.14
CMTM1-220ENST00000534143 TRIM34Q9BYJ4 488 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 MRC1P22897 1456 aa7.93□□□□□ -1.14
CMTM1-220ENST00000534143 TOGARAM1Q9Y4F4 1720 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 KDM3BQ7LBC6 1761 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 ITGB4P16144 1822 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 ERVV-2B6SEH9 535 aa7.92□□□□□ -1.14
CMTM1-220ENST00000534143 TIMP2P16035 220 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms