RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 KIF1AQ12756 1690 aa7.57□□□□□ -1.2
CHKA-208ENST00000533910 MAP2P11137 1827 aaKnown RBP7.57□□□□□ -1.2
CHKA-208ENST00000533910 OVOS2A0A0J9YW53 1432 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 OVOS2Q6IE36 1432 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 FYB1O15117 783 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 ALDH1A1P00352 501 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 SEC13P55735 322 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 INTS6LQ5JSJ4 861 aaKnown RBP7.56□□□□□ -1.2
CHKA-208ENST00000533910 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHKA-208ENST00000533910 TSEN2Q8NCE0 465 aaKnown RBP7.56□□□□□ -1.2
CHKA-208ENST00000533910 EHBP1Q8NDI1 1231 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 HPS1Q92902 700 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
CHKA-208ENST00000533910 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
CHKA-208ENST00000533910 XIRP1Q702N8 1843 aaKnown RBP7.56□□□□□ -1.2
CHKA-208ENST00000533910 IQSEC2Q5JU85 1478 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
CHKA-208ENST00000533910 ARID4AP29374 1257 aaPredicted RBP7.55□□□□□ -1.2
CHKA-208ENST00000533910 USP4Q13107 963 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 OCLNQ16625 522 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 NBPF20Q3BBV1 942 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 VASH1Q7L8A9 365 aaPredicted RBP7.55□□□□□ -1.2
CHKA-208ENST00000533910 TRMT44Q8IYL2 757 aaKnown RBP7.55□□□□□ -1.2
CHKA-208ENST00000533910 KIFC2Q96AC6 838 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 MKNK1Q9BUB5 465 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 AATKQ6ZMQ8 1374 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 PNPLA6Q8IY17 1366 aa7.55□□□□□ -1.2
CHKA-208ENST00000533910 DCCP43146 1447 aa7.54□□□□□ -1.2
CHKA-208ENST00000533910 NCOA3Q9Y6Q9 1424 aa7.54□□□□□ -1.2
CHKA-208ENST00000533910 SWI5Q1ZZU3 235 aa7.54□□□□□ -1.2
CHKA-208ENST00000533910 TRPM3Q9HCF6 1732 aaPredicted RBP7.54□□□□□ -1.2
CHKA-208ENST00000533910 ACEP12821 1306 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 SOWAHDA6NJG2 315 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 WFS1O76024 890 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 ABL1P00519 1130 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 CDK11BP21127 795 aaKnown RBP7.53□□□□□ -1.2
CHKA-208ENST00000533910 ZNF211Q13398 564 aaPredicted RBP7.53□□□□□ -1.2
CHKA-208ENST00000533910 WDR43Q15061 677 aaKnown RBP eCLIP7.53□□□□□ -1.2
CHKA-208ENST00000533910 NOM1Q5C9Z4 860 aaKnown RBP7.53□□□□□ -1.2
CHKA-208ENST00000533910 TRIM47Q96LD4 638 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 GGNBP2Q9H3C7 697 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 CYLDQ9NQC7 956 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 SEPT3Q9UH03 358 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 TLL2Q9Y6L7 1015 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 WASF2Q9Y6W5 498 aa7.53□□□□□ -1.2
CHKA-208ENST00000533910 TTC21BQ7Z4L5 1316 aa7.52□□□□□ -1.2
CHKA-208ENST00000533910 TTC21AQ8NDW8 1320 aa7.52□□□□□ -1.2
CHKA-208ENST00000533910 PHRF1Q9P1Y6 1649 aaKnown RBP7.52□□□□□ -1.2
CHKA-208ENST00000533910 RGPD1P0DJD0 1748 aa7.52□□□□□ -1.2
CHKA-208ENST00000533910 PEAK1Q9H792 1746 aa7.52□□□□□ -1.2
CHKA-208ENST00000533910 USP31Q70CQ4 1352 aa7.52□□□□□ -1.21
CHKA-208ENST00000533910 MTHFSP49914 203 aa7.52□□□□□ -1.21
CHKA-208ENST00000533910 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
CHKA-208ENST00000533910 CFAP53Q96M91 514 aa7.52□□□□□ -1.21
CHKA-208ENST00000533910 CXXC1Q9P0U4 656 aaPredicted RBP7.52□□□□□ -1.21
CHKA-208ENST00000533910 RBM19Q9Y4C8 960 aaKnown RBP7.52□□□□□ -1.21
CHKA-208ENST00000533910 SIAH2O43255 324 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 HSP90B1P14625 803 aaKnown RBP7.51□□□□□ -1.21
CHKA-208ENST00000533910 FSHRP23945 695 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 VARSP26640 1264 aaKnown RBP7.51□□□□□ -1.21
CHKA-208ENST00000533910 GRM5P41594 1212 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 NME9Q86XW9 330 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHKA-208ENST00000533910 ZNF358Q9NW07 568 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
CHKA-208ENST00000533910 ZNF521Q96K83 1311 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 ALS2Q96Q42 1657 aa7.51□□□□□ -1.21
CHKA-208ENST00000533910 TMEM229AB2RXF0 380 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 MYCP01106 439 aaPredicted RBP7.5□□□□□ -1.21
CHKA-208ENST00000533910 TNNT2P45379 298 aaPredicted RBP7.5□□□□□ -1.21
CHKA-208ENST00000533910 PDE3BQ13370 1112 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 TNS4Q8IZW8 715 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 NUDCQ9Y266 331 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 LTN1O94822 1766 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 MST1RQ04912 1400 aa7.5□□□□□ -1.21
CHKA-208ENST00000533910 C1orf167Q5SNV9 1468 aa7.49□□□□□ -1.21
CHKA-208ENST00000533910 NFAT5O94916 1531 aa7.49□□□□□ -1.21
CHKA-208ENST00000533910 SNRPBP14678 240 aaKnown RBP7.49□□□□□ -1.21
CHKA-208ENST00000533910 HSPA2P54652 639 aa7.49□□□□□ -1.21
CHKA-208ENST00000533910 FKBP5Q13451 457 aaPredicted RBP7.49□□□□□ -1.21
CHKA-208ENST00000533910 NAA30Q147X3 362 aaPredicted RBP7.49□□□□□ -1.21
CHKA-208ENST00000533910 TAS1R3Q7RTX0 852 aa7.49□□□□□ -1.21
CHKA-208ENST00000533910 NGEFQ8N5V2 710 aa7.49□□□□□ -1.21
CHKA-208ENST00000533910 ZNF784Q8NCA9 323 aaPredicted RBP7.49□□□□□ -1.21
CHKA-208ENST00000533910 COG3Q96JB2 828 aa7.49□□□□□ -1.21
CHKA-208ENST00000533910 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
CHKA-208ENST00000533910 TMEM94Q12767 1356 aa7.48□□□□□ -1.21
CHKA-208ENST00000533910 SLIT3O75094 1523 aa7.48□□□□□ -1.21
CHKA-208ENST00000533910 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
CHKA-208ENST00000533910 SCNN1DP51172 638 aa7.48□□□□□ -1.21
CHKA-208ENST00000533910 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
CHKA-208ENST00000533910 TBCELQ5QJ74 424 aa7.48□□□□□ -1.21
CHKA-208ENST00000533910 POLKQ9UBT6 870 aa7.48□□□□□ -1.21
CHKA-208ENST00000533910 CRYBG1Q9Y4K1 1723 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms