RNA–Protein interactions for RNA: ENST00000533627.5

TMEM25-228, Transcript of transmembrane protein 25, human

TSL 2

Gene TMEM25, Length 3,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM25-228	ENST00000533627	IL15	P40933	162 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	JAKMIP1	Q96N16	626 aa	Known RBP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	SLIT2	O94813	1529 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	HSPA1L	P34931	641 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	IL6ST	P40189	918 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	TPRN	Q4KMQ1	711 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	METTL24	Q5JXM2	366 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	SUSD4	Q5VX71	490 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	NRAP	Q86VF7	1730 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	MSN	P26038	577 aa	Known RBP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	TTLL11	Q8NHH1	800 aa		13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	RBM8A	Q9Y5S9	174 aa	Known RBP	13.6	□□□□□ -0.23
TMEM25-228	ENST00000533627	BCL9L	Q86UU0	1499 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	ATP5J	P18859	108 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	IFIT1	P09914	478 aa	Known RBP	13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	EIF5	P55010	431 aa	Known RBP	13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	CTSW	P56202	376 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	BARGIN	Q6ZT62	677 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	RNF214	Q8ND24	703 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	JCAD	Q9P266	1359 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	CCDC171	Q6TFL3	1326 aa		13.59	□□□□□ -0.23
TMEM25-228	ENST00000533627	RRP9	O43818	475 aa	Known RBP	13.58	□□□□□ -0.23
TMEM25-228	ENST00000533627	PDLIM2	Q96JY6	352 aa		13.58	□□□□□ -0.23
TMEM25-228	ENST00000533627	SEC31B	Q9NQW1	1179 aa		13.58	□□□□□ -0.23
TMEM25-228	ENST00000533627	LINC00116	Q8NCU8	138 aa		13.58	□□□□□ -0.24
TMEM25-228	ENST00000533627	SCARF1	Q14162	830 aa		13.58	□□□□□ -0.24
TMEM25-228	ENST00000533627	XAGE2	Q96GT9	111 aa		13.58	□□□□□ -0.24
TMEM25-228	ENST00000533627	GDPD2	Q9HCC8	539 aa		13.58	□□□□□ -0.24
TMEM25-228	ENST00000533627	TAF5L	O75529	589 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	OFD1	O75665	1012 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	PAG1	Q9NWQ8	432 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	MYH14	Q7Z406	1995 aa	Known RBP	13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	ANKRD18B	A2A2Z9	1011 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	PHF14	O94880	888 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	TRIM28	Q13263	835 aa	Known RBP	13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	VPS72	Q15906	364 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	TTC39A	Q5SRH9	613 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	LRSAM1	Q6UWE0	723 aa		13.57	□□□□□ -0.24
TMEM25-228	ENST00000533627	LRP6	O75581	1613 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	AK2	P54819	239 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	WNK3	Q9BYP7	1800 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	BRD1	O95696	1058 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	HAUS7	Q99871	368 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	VPS53	Q5VIR6	699 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	CREB3L3	Q68CJ9	461 aa		13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	SRP68	Q9UHB9	627 aa	Known RBP	13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	NOL7	Q9UMY1	257 aa	Known RBP	13.56	□□□□□ -0.24
TMEM25-228	ENST00000533627	COL15A1	P39059	1388 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	CAMTA2	O94983	1202 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	ANAPC15	P60006	121 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	NUP98	P52948	1817 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627		A0A0G2JLW4	131 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	LARGE1	O95461	756 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	CUL4A	Q13619	759 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	ATP2B3	Q16720	1220 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	ZNF34	Q8IZ26	560 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	ZNF609	O15014	1411 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	AFF2	P51816	1311 aa		13.55	□□□□□ -0.24
TMEM25-228	ENST00000533627	GADD45B	O75293	160 aa	Predicted RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	CSF1R	P07333	972 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	GTF2E1	P29083	439 aa	Predicted RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	SH3TC1	Q8TE82	1336 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	GNPAT	O15228	680 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	PDE8A	O60658	829 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	TPM2	P07951	284 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	ZKSCAN1	P17029	563 aa	Predicted RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	WASHC4	Q2M389	1173 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	CCDC158	Q5M9N0	1113 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	AMIGO3	Q86WK7	504 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	UTP14A	Q9BVJ6	771 aa	Known RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	LRRC2	Q9BYS8	371 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	HIP1	O00291	1037 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	SLC27A2	O14975	620 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	ZAP70	P43403	619 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	RBM10	P98175	930 aa	Known RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	NECAB1	Q8N987	351 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	CERK	Q8TCT0	537 aa		13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.54	□□□□□ -0.24
TMEM25-228	ENST00000533627	ERVV-1	B6SEH8	477 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	RUFY3	Q7L099	469 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	KBTBD3	Q8NAB2	608 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	WTIP	A6NIX2	430 aa	Predicted RBP	13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	STK3	Q13188	491 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	NECTIN1	Q15223	517 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	MPHOSPH8	Q99549	860 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	PDRG1	Q9NUG6	133 aa		13.53	□□□□□ -0.24
TMEM25-228	ENST00000533627	CIAO1	O76071	339 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	CCDC83	Q8IWF9	413 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	MPND	Q8N594	471 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	MAP4K1	Q92918	833 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	SMARCC1	Q92922	1105 aa	Predicted RBP	13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	CCNL1	Q9UK58	526 aa	Predicted RBP	13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	RIPOR2	Q9Y4F9	1068 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	NPHP1	O15259	732 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	C3orf67	Q6ZVT6	689 aa		13.52	□□□□□ -0.24
TMEM25-228	ENST00000533627	CYP46A1	Q9Y6A2	500 aa		13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms