RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RABL6Q3YEC7 729 aaPredicted RBP19.57■□□□□ 0.72
CTSB-228ENST00000533455 ZNF790Q6PG37 636 aa19.57■□□□□ 0.72
CTSB-228ENST00000533455 MYD88Q99836 296 aa19.57■□□□□ 0.72
CTSB-228ENST00000533455 SH3TC1Q8TE82 1336 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
CTSB-228ENST00000533455 ADD1P35611 737 aaKnown RBP19.56■□□□□ 0.72
CTSB-228ENST00000533455 MCMDC2Q4G0Z9 681 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 XAGE3Q8WTP9 111 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 HAUS7Q99871 368 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 CLIP2Q9UDT6 1046 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 KDM6AO15550 1401 aaPredicted RBP19.56■□□□□ 0.72
CTSB-228ENST00000533455 HSP90B1P14625 803 aaKnown RBP19.56■□□□□ 0.72
CTSB-228ENST00000533455 SCRN1Q12765 414 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 TFCP2Q12800 502 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 RCOR1Q9UKL0 485 aa19.56■□□□□ 0.72
CTSB-228ENST00000533455 HMGB1P09429 215 aaKnown RBP19.55■□□□□ 0.72
CTSB-228ENST00000533455 MRFAP1L1Q96HT8 127 aa19.55■□□□□ 0.72
CTSB-228ENST00000533455 PALLDQ8WX93 1383 aa19.55■□□□□ 0.72
CTSB-228ENST00000533455 ABCC6O95255 1503 aa19.55■□□□□ 0.72
CTSB-228ENST00000533455 STX1AQ16623 288 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 ATL3Q6DD88 541 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 COPS6Q7L5N1 327 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 LRP10Q7Z4F1 713 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 TICAM2Q86XR7 235 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 CACTINQ8WUQ7 758 aaKnown RBP19.54■□□□□ 0.72
CTSB-228ENST00000533455 SLC52A2Q9HAB3 445 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 PRDM10Q9NQV6 1147 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 PAXBP1Q9Y5B6 917 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 NEMFO60524 1076 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 CCDC129Q6ZRS4 1044 aa19.54■□□□□ 0.72
CTSB-228ENST00000533455 NSUN7Q8NE18 718 aaKnown RBP19.54■□□□□ 0.72
CTSB-228ENST00000533455 TNNT1P13805 278 aa19.53■□□□□ 0.72
CTSB-228ENST00000533455 NCBP1Q09161 790 aaKnown RBP19.53■□□□□ 0.72
CTSB-228ENST00000533455 CCDC144BQ3MJ40 725 aa19.53■□□□□ 0.72
CTSB-228ENST00000533455 STOX1Q6ZVD7 989 aa19.53■□□□□ 0.72
CTSB-228ENST00000533455 CCDC144CPQ8IYA2 1237 aa19.53■□□□□ 0.72
CTSB-228ENST00000533455 DDX11Q96FC9 970 aa19.53■□□□□ 0.72
CTSB-228ENST00000533455 C16orf45Q96MC5 204 aaPredicted RBP19.53■□□□□ 0.72
CTSB-228ENST00000533455 AGXT2Q9BYV1 514 aa19.53■□□□□ 0.72
CTSB-228ENST00000533455 ZNF142P52746 1687 aaPredicted RBP19.53■□□□□ 0.72
CTSB-228ENST00000533455 MYL6BP14649 208 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 CBX1P83916 185 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 SEC62Q99442 399 aaKnown RBP19.52■□□□□ 0.72
CTSB-228ENST00000533455 DBNDD2Q9BQY9 259 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 GTPBP4Q9BZE4 634 aaKnown RBP19.52■□□□□ 0.72
CTSB-228ENST00000533455 LAMB4A4D0S4 1761 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 GOLGA6L19H0YKK7 550 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 SLC39A6Q13433 755 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 ANKRD13DQ6ZTN6 518 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 C11orf57Q6ZUT1 292 aaPredicted RBP19.52■□□□□ 0.72
CTSB-228ENST00000533455 DHX32Q7L7V1 743 aaKnown RBP19.52■□□□□ 0.72
CTSB-228ENST00000533455 KBTBD3Q8NAB2 608 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 DNAJC2Q99543 621 aaKnown RBP19.52■□□□□ 0.72
CTSB-228ENST00000533455 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
CTSB-228ENST00000533455 SPEF2Q9C093 1822 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
CTSB-228ENST00000533455 CCAR1Q8IX12 1150 aaKnown RBP19.51■□□□□ 0.71
CTSB-228ENST00000533455 FEZ1Q99689 392 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 SALL1Q9NSC2 1324 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 MST1RQ04912 1400 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 DSCC1Q9BVC3 393 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 GOLPH3LQ9H4A5 285 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 HELLSQ9NRZ9 838 aa19.51■□□□□ 0.71
CTSB-228ENST00000533455 ERBB3P21860 1342 aa19.5■□□□□ 0.71
CTSB-228ENST00000533455 PTPDC1A2A3K4 754 aa19.5■□□□□ 0.71
CTSB-228ENST00000533455 EXOSC10Q01780 885 aaKnown RBP19.5■□□□□ 0.71
CTSB-228ENST00000533455 SNW1Q13573 536 aaKnown RBP19.5■□□□□ 0.71
CTSB-228ENST00000533455 LRRC8AQ8IWT6 810 aa19.5■□□□□ 0.71
CTSB-228ENST00000533455 ENGASEQ8NFI3 743 aa19.5■□□□□ 0.71
CTSB-228ENST00000533455 ZNF396Q96N95 335 aaPredicted RBP19.5■□□□□ 0.71
CTSB-228ENST00000533455 NDUFB9Q9Y6M9 179 aa19.5■□□□□ 0.71
CTSB-228ENST00000533455 CHGBP05060 677 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 TPD52L1Q16890 204 aaPredicted RBP19.49■□□□□ 0.71
CTSB-228ENST00000533455 CCDC73Q6ZRK6 1079 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 ADAMTSL3P82987 1691 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 CASP7P55210 303 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 FAM160A1Q05DH4 1040 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 DDX46Q7L014 1031 aaKnown RBP19.49■□□□□ 0.71
CTSB-228ENST00000533455 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 ANO10Q9NW15 660 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 GLI3P10071 1580 aa19.49■□□□□ 0.71
CTSB-228ENST00000533455 PLEKHG2Q9H7P9 1386 aa19.48■□□□□ 0.71
CTSB-228ENST00000533455 U2AF2P26368 475 aaKnown RBP eCLIP19.48■□□□□ 0.71
CTSB-228ENST00000533455 FGD1P98174 961 aa19.48■□□□□ 0.71
CTSB-228ENST00000533455 UBE3BQ7Z3V4 1068 aa19.48■□□□□ 0.71
CTSB-228ENST00000533455 ANKLE2Q86XL3 938 aa19.48■□□□□ 0.71
CTSB-228ENST00000533455 CCDC112Q8NEF3 446 aa19.48■□□□□ 0.71
CTSB-228ENST00000533455 RBM33Q96EV2 1170 aaKnown RBP19.48■□□□□ 0.71
CTSB-228ENST00000533455 ZNF496Q96IT1 587 aaPredicted RBP19.48■□□□□ 0.71
CTSB-228ENST00000533455 USP28Q96RU2 1077 aa19.48■□□□□ 0.71
CTSB-228ENST00000533455 PHKG2P15735 406 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 DHX40Q8IX18 779 aaKnown RBP19.47■□□□□ 0.71
CTSB-228ENST00000533455 CHMP4CQ96CF2 233 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 KCND1Q9NSA2 647 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 ALS2Q96Q42 1657 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 TMEM94Q12767 1356 aa19.47■□□□□ 0.71
CTSB-228ENST00000533455 KINO60870 393 aaKnown RBP19.47■□□□□ 0.71
CTSB-228ENST00000533455 SNRPA1P09661 255 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms