RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 RRP15Q9Y3B9 282 aaKnown RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 NEDD9Q14511 834 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 ZSCAN25Q6NSZ9 544 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 LOC102724159A0A0B4J2E5 919 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC69A6NI79 296 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 LUC7L3O95232 432 aaKnown RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 SYT1P21579 422 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 PWP2Q15269 919 aaKnown RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 SELENOSQ9BQE4 189 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 EIF2S2P20042 333 aaKnown RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 HOOK3Q86VS8 718 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 TSC1Q92574 1164 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 TBC1D31Q96DN5 1066 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 UBASH3AP57075 661 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 VPS36Q86VN1 386 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 ABTB2Q8N961 1025 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 MORC4Q8TE76 937 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 RBM42Q9BTD8 480 aaKnown RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 GNAI3P08754 354 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 SRCIN1Q9C0H9 1055 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 MAGI3Q5TCQ9 1506 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 BIN1O00499 593 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 STX6O43752 255 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 CETN2P41208 172 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 LIG3P49916 1009 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC174Q6PII3 467 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 EHMT1Q9H9B1 1298 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 SH2B1Q9NRF2 756 aaPredicted RBP8.92□□□□□ -0.98
CSRP1-218ENST00000533402 ODF2LQ9ULJ1 636 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 TTC21AQ8NDW8 1320 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
CSRP1-218ENST00000533402 ATF7IPQ6VMQ6 1270 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 NLRP6P59044 892 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 NGLY1Q96IV0 654 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 CASQ2O14958 399 aaPredicted RBP8.92□□□□□ -0.98
CSRP1-218ENST00000533402 CDKL5O76039 1030 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 SEC62Q99442 399 aaKnown RBP8.92□□□□□ -0.98
CSRP1-218ENST00000533402 SRGAP3O43295 1099 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 RFX1P22670 979 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 MIER3Q7Z3K6 550 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 IRAK4Q9NWZ3 460 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 RIPOR2Q9Y4F9 1068 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 ANKRD36BQ8N2N9 1353 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 LRRD1A4D1F6 860 aa8.92□□□□□ -0.98
CSRP1-218ENST00000533402 RNF10Q8N5U6 811 aaKnown RBP8.92□□□□□ -0.98
CSRP1-218ENST00000533402 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
CSRP1-218ENST00000533402 TRIM68Q6AZZ1 485 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 NEUROD6Q96NK8 337 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 HOMER2Q9NSB8 354 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 MYO1BO43795 1136 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 VAV2P52735 878 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 SOGA3Q5TF21 947 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 ISM2Q6H9L7 571 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 RABEP2Q9H5N1 569 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 SETD1BQ9UPS6 1966 aaKnown RBP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 IQGAP3Q86VI3 1631 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 ABCA9Q8IUA7 1624 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 B4DLN1 442 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 ZNF500O60304 480 aaPredicted RBP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 MRPL12P52815 198 aaKnown RBP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 MPHOSPH8Q99549 860 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 STARD3NLO95772 234 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC96Q2M329 555 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 TDRD12Q587J7 1177 aaKnown RBP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC30Q5VVM6 783 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 EFCAB13Q8IY85 973 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 SECISBP2LQ93073 1101 aaKnown RBP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 CABS1Q96KC9 395 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 PRAM1Q96QH2 718 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 TSPOAP1O95153 1857 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC40Q4G0X9 1142 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 INTS8Q75QN2 995 aaKnown RBP8.91□□□□□ -0.98
CSRP1-218ENST00000533402 CADPS2Q86UW7 1296 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 TCP11L2Q8N4U5 519 aa8.91□□□□□ -0.98
CSRP1-218ENST00000533402 LAMC1P11047 1609 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 KRT32Q14532 448 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC184Q52MB2 194 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 C17orf53Q8N3J3 647 aaPredicted RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 TMEM57Q8N5G2 664 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 TACO1Q9BSH4 297 aaKnown RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 GNAI2P04899 355 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 POTEJP0CG39 1038 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 COG7P83436 770 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 EXOSC9Q06265 439 aaKnown RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 SNCBQ16143 134 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CFAP58Q5T655 872 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CTNNBL1Q8WYA6 563 aaPredicted RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 JPH2Q9BR39 696 aaPredicted RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CABP4P57796 275 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 C20orf194Q5TEA3 1177 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CWC27Q6UX04 472 aaKnown RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 USP48Q86UV5 1035 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 SIL1Q9H173 461 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 C14orf93Q9H972 538 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms