RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 NUDT8Q8WV74 236 aa12.2□□□□□ -0.46
PKHD1L1-203ENST00000533183 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
PKHD1L1-203ENST00000533183 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
PKHD1L1-203ENST00000533183 PIK3R2O00459 728 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 GNB5O14775 395 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 LILRB5O75023 590 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 TNFRSF21O75509 655 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 KCNMA1Q12791 1236 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 HYAL2Q12891 473 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 COL13A1Q5TAT6 717 aaPredicted RBP12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 C1orf127Q8N9H9 656 aa12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 JPH1Q9HDC5 661 aaPredicted RBP12.19□□□□□ -0.46
PKHD1L1-203ENST00000533183 RGS9O75916 674 aaPredicted RBP12.18□□□□□ -0.46
PKHD1L1-203ENST00000533183 KIF4AO95239 1232 aa12.18□□□□□ -0.46
PKHD1L1-203ENST00000533183 EIF2AK2P19525 551 aaKnown RBP12.18□□□□□ -0.46
PKHD1L1-203ENST00000533183 IRS1P35568 1242 aa12.18□□□□□ -0.46
PKHD1L1-203ENST00000533183 ELMSAN1Q6PJG2 1045 aa12.18□□□□□ -0.46
PKHD1L1-203ENST00000533183 CHRDQ9H2X0 955 aa12.18□□□□□ -0.46
PKHD1L1-203ENST00000533183 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
PKHD1L1-203ENST00000533183 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
PKHD1L1-203ENST00000533183 TTC9Q92623 222 aa12.17□□□□□ -0.46
PKHD1L1-203ENST00000533183 FAM129BQ96TA1 746 aa12.17□□□□□ -0.46
PKHD1L1-203ENST00000533183 GHRHP01286 108 aa12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 CES1P23141 567 aa12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 GSK3AP49840 483 aa12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 PMEPA1Q969W9 287 aa12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 SMG9Q9H0W8 520 aaKnown RBP12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
PKHD1L1-203ENST00000533183 NID1P14543 1247 aa12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 AFF1P51825 1210 aaKnown RBP12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 PLD4Q96BZ4 506 aa12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 RBSNQ9H1K0 784 aa12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 SUV39H2Q9H5I1 410 aa12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 KANSL3Q9P2N6 904 aa12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 DCTN4Q9UJW0 460 aa12.15□□□□□ -0.46
PKHD1L1-203ENST00000533183 PHACTR2O75167 634 aa12.14□□□□□ -0.47
PKHD1L1-203ENST00000533183 SPACA7Q96KW9 195 aa12.14□□□□□ -0.47
PKHD1L1-203ENST00000533183 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
PKHD1L1-203ENST00000533183 IGHA2P01877 340 aa12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 GRIK5Q16478 980 aa12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 NCAPG2Q86XI2 1143 aa12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 PLVAPQ9BX97 442 aa12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 NOP53Q9NZM5 478 aaKnown RBP12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
PKHD1L1-203ENST00000533183 RASSF7Q02833 373 aa12.12□□□□□ -0.47
PKHD1L1-203ENST00000533183 CEP120Q8N960 986 aa12.12□□□□□ -0.47
PKHD1L1-203ENST00000533183 TMC1Q8TDI8 760 aa12.12□□□□□ -0.47
PKHD1L1-203ENST00000533183 EREGO14944 169 aa12.11□□□□□ -0.47
PKHD1L1-203ENST00000533183 COL8A1P27658 744 aa12.11□□□□□ -0.47
PKHD1L1-203ENST00000533183 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
PKHD1L1-203ENST00000533183 GPR182O15218 404 aa12.1□□□□□ -0.47
PKHD1L1-203ENST00000533183 MAPK1P28482 360 aa12.1□□□□□ -0.47
PKHD1L1-203ENST00000533183 DMRTB1Q96MA1 342 aa12.1□□□□□ -0.47
PKHD1L1-203ENST00000533183 NEFLP07196 543 aa12.09□□□□□ -0.47
PKHD1L1-203ENST00000533183 ATP11AP98196 1134 aa12.09□□□□□ -0.47
PKHD1L1-203ENST00000533183 TMC7Q7Z402 723 aa12.09□□□□□ -0.47
PKHD1L1-203ENST00000533183 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
PKHD1L1-203ENST00000533183 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
PKHD1L1-203ENST00000533183 ILDR2Q71H61 639 aa12.08□□□□□ -0.48
PKHD1L1-203ENST00000533183 PBX4Q9BYU1 374 aa12.08□□□□□ -0.48
PKHD1L1-203ENST00000533183 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
PKHD1L1-203ENST00000533183 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.48
PKHD1L1-203ENST00000533183 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
PKHD1L1-203ENST00000533183 SND1Q7KZF4 910 aaKnown RBP eCLIP12.07□□□□□ -0.48
PKHD1L1-203ENST00000533183 ALYREFQ86V81 257 aaKnown RBP12.07□□□□□ -0.48
PKHD1L1-203ENST00000533183 ALKBH8Q96BT7 664 aaKnown RBP12.07□□□□□ -0.48
PKHD1L1-203ENST00000533183 SMNDC1O75940 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 GDF11O95390 407 aa12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 EDN3P14138 238 aa12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 ORC1Q13415 861 aa12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 TRAPPC3LQ5T215 181 aa12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 TMEM151AQ8N4L1 468 aa12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 TRIM33Q9UPN9 1127 aa12.06□□□□□ -0.48
PKHD1L1-203ENST00000533183 ACPPP15309 386 aa12.05□□□□□ -0.48
PKHD1L1-203ENST00000533183 CEP135Q66GS9 1140 aa12.05□□□□□ -0.48
PKHD1L1-203ENST00000533183 GDF6Q6KF10 455 aaPredicted RBP12.05□□□□□ -0.48
PKHD1L1-203ENST00000533183 WFDC8Q8IUA0 241 aa12.05□□□□□ -0.48
PKHD1L1-203ENST00000533183 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
PKHD1L1-203ENST00000533183 DZANK1Q9NVP4 752 aa12.05□□□□□ -0.48
PKHD1L1-203ENST00000533183 NFKBIEO00221 500 aa12.04□□□□□ -0.48
PKHD1L1-203ENST00000533183 DMRTC2Q8IXT2 367 aaPredicted RBP12.04□□□□□ -0.48
PKHD1L1-203ENST00000533183 CACTIN-AS1Q8N1I8 211 aa12.04□□□□□ -0.48
PKHD1L1-203ENST00000533183 CPNE3O75131 537 aaKnown RBP12.03□□□□□ -0.48
PKHD1L1-203ENST00000533183 POLR3DP05423 398 aaPredicted RBP12.03□□□□□ -0.48
PKHD1L1-203ENST00000533183 BAG6P46379 1132 aa12.03□□□□□ -0.48
PKHD1L1-203ENST00000533183 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
PKHD1L1-203ENST00000533183 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 PRRT3Q5FWE3 981 aa12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 GALNT12Q8IXK2 581 aa12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 ASB16Q96NS5 453 aa12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 POP1Q99575 1024 aaKnown RBP12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 OSMRQ99650 979 aa12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
PKHD1L1-203ENST00000533183 A0A0A0MRY4 1105 aa12.01□□□□□ -0.49
PKHD1L1-203ENST00000533183 EIF1AYO14602 144 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms