RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
PUF60-221ENST00000533162 GJA3Q9Y6H8 435 aa18.73■□□□□ 0.59
PUF60-221ENST00000533162 UTYO14607 1347 aa18.73■□□□□ 0.59
PUF60-221ENST00000533162 TIAM2Q8IVF5 1701 aa18.72■□□□□ 0.59
PUF60-221ENST00000533162 FSTL1Q12841 308 aa18.72■□□□□ 0.59
PUF60-221ENST00000533162 POLLQ9UGP5 575 aa18.72■□□□□ 0.59
PUF60-221ENST00000533162 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
PUF60-221ENST00000533162 DICER1Q9UPY3 1922 aaKnown RBP18.71■□□□□ 0.59
PUF60-221ENST00000533162 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
PUF60-221ENST00000533162 FRAT1Q92837 279 aaPredicted RBP18.71■□□□□ 0.59
PUF60-221ENST00000533162 HACL1Q9UJ83 578 aa18.71■□□□□ 0.59
PUF60-221ENST00000533162 ZNF541Q9H0D2 1346 aa18.71■□□□□ 0.59
PUF60-221ENST00000533162 RIMBP2O15034 1052 aa18.7■□□□□ 0.58
PUF60-221ENST00000533162 NBPF7P0C2Y1 421 aaPredicted RBP18.7■□□□□ 0.58
PUF60-221ENST00000533162 KCNJ4P48050 445 aa18.7■□□□□ 0.58
PUF60-221ENST00000533162 PNMA8AQ86V59 439 aaPredicted RBP18.7■□□□□ 0.58
PUF60-221ENST00000533162 LEMD3Q9Y2U8 911 aa18.7■□□□□ 0.58
PUF60-221ENST00000533162 CCDC88AQ3V6T2 1871 aa18.69■□□□□ 0.58
PUF60-221ENST00000533162 UBTFL1P0CB47 393 aaPredicted RBP18.69■□□□□ 0.58
PUF60-221ENST00000533162 CIAPIN1Q6FI81 312 aa18.69■□□□□ 0.58
PUF60-221ENST00000533162 SLC51AQ86UW1 340 aa18.69■□□□□ 0.58
PUF60-221ENST00000533162 SUCLG2Q96I99 432 aa18.69■□□□□ 0.58
PUF60-221ENST00000533162 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
PUF60-221ENST00000533162 ATF7IPQ6VMQ6 1270 aa18.68■□□□□ 0.58
PUF60-221ENST00000533162 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
PUF60-221ENST00000533162 USP44Q9H0E7 712 aa18.68■□□□□ 0.58
PUF60-221ENST00000533162 CNNM1Q9NRU3 951 aa18.68■□□□□ 0.58
PUF60-221ENST00000533162 BCAR3O75815 825 aa18.67■□□□□ 0.58
PUF60-221ENST00000533162 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
PUF60-221ENST00000533162 WDR90Q96KV7 1748 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 POTECB2RU33 542 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 ECE2O60344 883 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 GNAI3P08754 354 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 CXCL9Q07325 125 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 EPHA10Q5JZY3 1008 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
PUF60-221ENST00000533162 DBNDD1Q9H9R9 158 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 LRRC37AA6NMS7 1700 aa18.66■□□□□ 0.58
PUF60-221ENST00000533162 RAD17O75943 681 aa18.65■□□□□ 0.58
PUF60-221ENST00000533162 EPHX2P34913 555 aa18.65■□□□□ 0.58
PUF60-221ENST00000533162 CHRNDQ07001 517 aa18.65■□□□□ 0.58
PUF60-221ENST00000533162 DOK7Q18PE1 504 aa18.65■□□□□ 0.58
PUF60-221ENST00000533162 RABL6Q3YEC7 729 aaPredicted RBP18.65■□□□□ 0.58
PUF60-221ENST00000533162 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
PUF60-221ENST00000533162 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
PUF60-221ENST00000533162 CLEC11AQ9Y240 323 aa18.65■□□□□ 0.58
PUF60-221ENST00000533162 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
PUF60-221ENST00000533162 MYH3P11055 1940 aa18.64■□□□□ 0.58
PUF60-221ENST00000533162 HSPA6P17066 643 aa18.64■□□□□ 0.57
PUF60-221ENST00000533162 EAPPQ56P03 285 aaPredicted RBP18.64■□□□□ 0.57
PUF60-221ENST00000533162 PODNQ7Z5L7 613 aa18.64■□□□□ 0.57
PUF60-221ENST00000533162 LDHDQ86WU2 507 aa18.64■□□□□ 0.57
PUF60-221ENST00000533162 TAF1P21675 1872 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 H7C1D1 291 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 MS4A1P11836 297 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 TRIM27P14373 513 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 RPS12P25398 132 aaKnown RBP18.63■□□□□ 0.57
PUF60-221ENST00000533162 CHADLQ6NUI6 762 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 COA1Q9GZY4 146 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
PUF60-221ENST00000533162 USP50Q70EL3 339 aaPredicted RBP18.62■□□□□ 0.57
PUF60-221ENST00000533162 KAZALD1Q96I82 304 aa18.62■□□□□ 0.57
PUF60-221ENST00000533162 GPR101Q96P66 508 aaPredicted RBP18.62■□□□□ 0.57
PUF60-221ENST00000533162 ADARB2Q9NS39 739 aaKnown RBP18.62■□□□□ 0.57
PUF60-221ENST00000533162 MROH5Q6ZUA9 1318 aa18.62■□□□□ 0.57
PUF60-221ENST00000533162 DUOX1Q9NRD9 1551 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 YDJCA8MPS7 323 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 PLIN1O60240 522 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 GMPSP49915 693 aaPredicted RBP18.61■□□□□ 0.57
PUF60-221ENST00000533162 APLP1P51693 650 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 ANKRD44Q8N8A2 993 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 DPF2Q92785 391 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 ZNF594Q96JF6 807 aaPredicted RBP18.61■□□□□ 0.57
PUF60-221ENST00000533162 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
PUF60-221ENST00000533162 COL4A5P29400 1685 aa18.6■□□□□ 0.57
PUF60-221ENST00000533162 PSMD14O00487 310 aa18.6■□□□□ 0.57
PUF60-221ENST00000533162 SCNN1DP51172 638 aa18.6■□□□□ 0.57
PUF60-221ENST00000533162 CLUAP1Q96AJ1 413 aa18.6■□□□□ 0.57
PUF60-221ENST00000533162 USP17L3A6NCW0 530 aa18.59■□□□□ 0.57
PUF60-221ENST00000533162 USP17L4A6NCW7 530 aa18.59■□□□□ 0.57
PUF60-221ENST00000533162 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
PUF60-221ENST00000533162 EPS15P42566 896 aa18.59■□□□□ 0.57
PUF60-221ENST00000533162 USP17L1Q7RTZ2 530 aa18.59■□□□□ 0.57
PUF60-221ENST00000533162 ZNF804AQ7Z570 1209 aa18.59■□□□□ 0.57
PUF60-221ENST00000533162 DZIP1LQ8IYY4 767 aaKnown RBP18.59■□□□□ 0.57
PUF60-221ENST00000533162 CNOT7Q9UIV1 285 aaKnown RBP18.59■□□□□ 0.57
PUF60-221ENST00000533162 COL4A1P02462 1669 aa18.59■□□□□ 0.57
PUF60-221ENST00000533162 SCN4AP35499 1836 aa18.58■□□□□ 0.57
PUF60-221ENST00000533162 TAF5LO75529 589 aa18.58■□□□□ 0.56
PUF60-221ENST00000533162 UBE4AQ14139 1066 aa18.58■□□□□ 0.56
PUF60-221ENST00000533162 METTL24Q5JXM2 366 aa18.58■□□□□ 0.56
PUF60-221ENST00000533162 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
PUF60-221ENST00000533162 FBXO3Q9UK99 471 aa18.58■□□□□ 0.56
PUF60-221ENST00000533162 GNAI2P04899 355 aa18.57■□□□□ 0.56
PUF60-221ENST00000533162 MMP14P50281 582 aa18.57■□□□□ 0.56
PUF60-221ENST00000533162 C15orf52Q6ZUT6 534 aaKnown RBP18.57■□□□□ 0.56
PUF60-221ENST00000533162 AGBL3Q8NEM8 1001 aa18.57■□□□□ 0.56
PUF60-221ENST00000533162 MEIS3Q99687 375 aa18.57■□□□□ 0.56
PUF60-221ENST00000533162 LRRFIP2Q9Y608 721 aaKnown RBP18.57■□□□□ 0.56
PUF60-221ENST00000533162 RSBN1LQ6PCB5 846 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms