RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 SP8Q8IXZ3 490 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 MPNDQ8N594 471 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 CFHR5Q9BXR6 569 aa13.11□□□□□ -0.31
CHMP4A-206ENST00000533011 TM4SF4P48230 202 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 NUTM1Q86Y26 1132 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 UBN2Q6ZU65 1347 aa13.1□□□□□ -0.31
CHMP4A-206ENST00000533011 TCERG1O14776 1098 aaKnown RBP13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 FKTNO75072 461 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 TWISTNBQ3B726 338 aaPredicted RBP13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 SUSD4Q5VX71 490 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 RASAL3Q86YV0 1011 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 ANKRD36CQ5JPF3 1778 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
CHMP4A-206ENST00000533011 TBC1D8O95759 1140 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 TCIRG1Q13488 830 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 SLC10A5Q5PT55 438 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 SAMD7Q7Z3H4 446 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 SLC17A8Q8NDX2 589 aa13.08□□□□□ -0.32
CHMP4A-206ENST00000533011 ABCC12Q96J65 1359 aa13.07□□□□□ -0.32
CHMP4A-206ENST00000533011 NTSR2O95665 410 aa13.07□□□□□ -0.32
CHMP4A-206ENST00000533011 TBC1D10BQ4KMP7 808 aaPredicted RBP13.07□□□□□ -0.32
CHMP4A-206ENST00000533011 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
CHMP4A-206ENST00000533011 MYH16Q9H6N6 1097 aa13.07□□□□□ -0.32
CHMP4A-206ENST00000533011 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
CHMP4A-206ENST00000533011 ADM5C9JUS6 153 aa13.06□□□□□ -0.32
CHMP4A-206ENST00000533011 ALDH1A1P00352 501 aa13.06□□□□□ -0.32
CHMP4A-206ENST00000533011 SREBF2Q12772 1141 aa13.06□□□□□ -0.32
CHMP4A-206ENST00000533011 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
CHMP4A-206ENST00000533011 STK31Q9BXU1 1019 aa13.06□□□□□ -0.32
CHMP4A-206ENST00000533011 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
CHMP4A-206ENST00000533011 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
CHMP4A-206ENST00000533011 DLK2Q6UY11 383 aa13.05□□□□□ -0.32
CHMP4A-206ENST00000533011 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
CHMP4A-206ENST00000533011 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
CHMP4A-206ENST00000533011 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
CHMP4A-206ENST00000533011 ZNF521Q96K83 1311 aa13.05□□□□□ -0.32
CHMP4A-206ENST00000533011 YDJCA8MPS7 323 aa13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 PSMD14O00487 310 aa13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 DDX58O95786 925 aaKnown RBP13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 INHBEP58166 350 aa13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
CHMP4A-206ENST00000533011 SHTN1A0MZ66 631 aa13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 VAMP4O75379 141 aa13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 TRIM28Q13263 835 aaKnown RBP13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 KIF4BQ2VIQ3 1234 aa13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
CHMP4A-206ENST00000533011 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 MIER1Q8N108 512 aa13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 GGA3Q9NZ52 723 aa13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 ABCC4O15439 1325 aa13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.33
CHMP4A-206ENST00000533011 MKI67P46013 3256 aaKnown RBP13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 EYA3Q99504 573 aa13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 TRIM17Q9Y577 477 aa13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 PITPNM2Q9BZ72 1349 aa13.01□□□□□ -0.33
CHMP4A-206ENST00000533011 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 E9PSI1 815 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 EGFRP00533 1210 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
CHMP4A-206ENST00000533011 GRAPQ13588 217 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 G2E3Q7L622 706 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
CHMP4A-206ENST00000533011 ARMC5Q96C12 935 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 MYD88Q99836 296 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 MAP3K2Q9Y2U5 619 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 CUL9Q8IWT3 2517 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 CACNA1FO60840 1977 aa13□□□□□ -0.33
CHMP4A-206ENST00000533011 VIL1P09327 827 aaKnown RBP12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 NF2P35240 595 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 OTOP1Q7RTM1 612 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 CCDC191Q8NCU4 936 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
CHMP4A-206ENST00000533011 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms