RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PRR5LQ6MZQ0 368 aa15.7■□□□□ 0.1
COPB1-208ENST00000532088 NBPF7P0C2Y1 421 aaPredicted RBP15.69■□□□□ 0.1
COPB1-208ENST00000532088 UBE3BQ7Z3V4 1068 aa15.69■□□□□ 0.1
COPB1-208ENST00000532088 FAM89AQ96GI7 184 aa15.69■□□□□ 0.1
COPB1-208ENST00000532088 MEIS3Q99687 375 aa15.69■□□□□ 0.1
COPB1-208ENST00000532088 SPON1Q9HCB6 807 aa15.69■□□□□ 0.1
COPB1-208ENST00000532088 ZBTB40Q9NUA8 1239 aa15.69■□□□□ 0.1
COPB1-208ENST00000532088 PDZRN3Q9UPQ7 1066 aa15.69■□□□□ 0.1
COPB1-208ENST00000532088 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
COPB1-208ENST00000532088 PDE8AO60658 829 aa15.68■□□□□ 0.1
COPB1-208ENST00000532088 GNAI2P04899 355 aa15.68■□□□□ 0.1
COPB1-208ENST00000532088 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
COPB1-208ENST00000532088 E2F4Q16254 413 aa15.68■□□□□ 0.1
COPB1-208ENST00000532088 CRBNQ96SW2 442 aa15.68■□□□□ 0.1
COPB1-208ENST00000532088 BRIP1Q9BX63 1249 aa15.68■□□□□ 0.1
COPB1-208ENST00000532088 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
COPB1-208ENST00000532088 ABCC12Q96J65 1359 aa15.67■□□□□ 0.1
COPB1-208ENST00000532088 KLRG2A4D1S0 409 aaPredicted RBP15.67■□□□□ 0.1
COPB1-208ENST00000532088 NEFLP07196 543 aa15.67■□□□□ 0.1
COPB1-208ENST00000532088 PTGER2P43116 358 aa15.67■□□□□ 0.1
COPB1-208ENST00000532088 ERFEQ4G0M1 354 aa15.67■□□□□ 0.1
COPB1-208ENST00000532088 ERICH6BQ5W0A0 696 aa15.67■□□□□ 0.1
COPB1-208ENST00000532088 DDX60Q8IY21 1712 aaKnown RBP15.67■□□□□ 0.1
COPB1-208ENST00000532088 NPHP1O15259 732 aa15.66■□□□□ 0.1
COPB1-208ENST00000532088 CAMK2BQ13554 666 aa15.66■□□□□ 0.1
COPB1-208ENST00000532088 RABL6Q3YEC7 729 aaPredicted RBP15.66■□□□□ 0.1
COPB1-208ENST00000532088 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
COPB1-208ENST00000532088 PLPP6Q8IY26 295 aa15.66■□□□□ 0.1
COPB1-208ENST00000532088 SUCLG2Q96I99 432 aa15.66■□□□□ 0.1
COPB1-208ENST00000532088 KIF13BQ9NQT8 1826 aa15.66■□□□□ 0.1
COPB1-208ENST00000532088 RTL9Q8NET4 1388 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 FAM177BA6PVY3 158 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 CSF1RP07333 972 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 PDE6BP35913 854 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 MTX1Q13505 466 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
COPB1-208ENST00000532088 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 NLRP3Q96P20 1036 aa15.65■□□□□ 0.1
COPB1-208ENST00000532088 CTSWP56202 376 aa15.64■□□□□ 0.09
COPB1-208ENST00000532088 FOXO4P98177 505 aa15.64■□□□□ 0.09
COPB1-208ENST00000532088 CRY2Q49AN0 593 aa15.64■□□□□ 0.09
COPB1-208ENST00000532088 RPAP2Q8IXW5 612 aaPredicted RBP15.64■□□□□ 0.09
COPB1-208ENST00000532088 MYH3P11055 1940 aa15.64■□□□□ 0.09
COPB1-208ENST00000532088 SYNE4Q8N205 404 aa15.63■□□□□ 0.09
COPB1-208ENST00000532088 EXOC6Q8TAG9 804 aa15.63■□□□□ 0.09
COPB1-208ENST00000532088 CD2APQ9Y5K6 639 aa15.63■□□□□ 0.09
COPB1-208ENST00000532088 LRRFIP2Q9Y608 721 aaKnown RBP15.63■□□□□ 0.09
COPB1-208ENST00000532088 ANKRD31Q8N7Z5 1873 aa15.63■□□□□ 0.09
COPB1-208ENST00000532088 HCLS1P14317 486 aaPredicted RBP15.62■□□□□ 0.09
COPB1-208ENST00000532088 TGFB2P61812 414 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 CCDC152Q4G0S7 254 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
COPB1-208ENST00000532088 ANKRD44Q8N8A2 993 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 SLAIN1Q8ND83 568 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 TTLL11Q8NHH1 800 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 KCNV2Q8TDN2 545 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 OTUD5Q96G74 571 aa15.62■□□□□ 0.09
COPB1-208ENST00000532088 BICC1Q9H694 974 aaKnown RBP15.62■□□□□ 0.09
COPB1-208ENST00000532088 TNRC6CQ9HCJ0 1690 aaKnown RBP15.62■□□□□ 0.09
COPB1-208ENST00000532088 LRP5O75197 1615 aa15.61■□□□□ 0.09
COPB1-208ENST00000532088 EPHA10Q5JZY3 1008 aa15.61■□□□□ 0.09
COPB1-208ENST00000532088 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
COPB1-208ENST00000532088 HOXA10P31260 410 aaPredicted RBP15.6■□□□□ 0.09
COPB1-208ENST00000532088 ATP8B2P98198 1209 aa15.6■□□□□ 0.09
COPB1-208ENST00000532088 CEP85Q6P2H3 762 aa15.6■□□□□ 0.09
COPB1-208ENST00000532088 LMBR1LQ6UX01 489 aa15.6■□□□□ 0.09
COPB1-208ENST00000532088 SRGNP10124 158 aa15.59■□□□□ 0.09
COPB1-208ENST00000532088 NPR1P16066 1061 aa15.59■□□□□ 0.09
COPB1-208ENST00000532088 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
COPB1-208ENST00000532088 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
COPB1-208ENST00000532088 DLEC1Q9Y238 1755 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 HMMRO75330 724 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 CCDC57Q2TAC2 916 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 SSH3Q8TE77 659 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
COPB1-208ENST00000532088 CRAMP1Q96RY5 1269 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
COPB1-208ENST00000532088 ANKRD18BA2A2Z9 1011 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 H0YIN7 160 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 IFIT5Q13325 482 aaKnown RBP15.57■□□□□ 0.08
COPB1-208ENST00000532088 DDX46Q7L014 1031 aaKnown RBP15.57■□□□□ 0.08
COPB1-208ENST00000532088 TMC4Q7Z404 712 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 CCDC24Q8N4L8 307 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 RPGRQ92834 1020 aaKnown RBP15.57■□□□□ 0.08
COPB1-208ENST00000532088 CDC5LQ99459 802 aaKnown RBP15.57■□□□□ 0.08
COPB1-208ENST00000532088 GREM2Q9H772 168 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 ARIH1Q9Y4X5 557 aaPredicted RBP15.57■□□□□ 0.08
COPB1-208ENST00000532088 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
COPB1-208ENST00000532088 KIAA1551Q9HCM1 1747 aa15.57■□□□□ 0.08
COPB1-208ENST00000532088 ITGA6P23229 1130 aa15.56■□□□□ 0.08
COPB1-208ENST00000532088 ALDH1B1P30837 517 aa15.56■□□□□ 0.08
COPB1-208ENST00000532088 RFX5P48382 616 aaPredicted RBP15.56■□□□□ 0.08
COPB1-208ENST00000532088 HDAC1Q13547 482 aaPredicted RBP15.56■□□□□ 0.08
COPB1-208ENST00000532088 GRAPQ13588 217 aa15.56■□□□□ 0.08
COPB1-208ENST00000532088 FAM161AQ3B820 660 aa15.56■□□□□ 0.08
COPB1-208ENST00000532088 C2CD5Q86YS7 1000 aa15.56■□□□□ 0.08
COPB1-208ENST00000532088 GRAPLQ8TC17 118 aaPredicted RBP15.56■□□□□ 0.08
COPB1-208ENST00000532088 PCDHB15Q9Y5E8 787 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms