RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TNFRSF21O75509 655 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 MAP4K4O95819 1239 aaPredicted RBP5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 VIL1P09327 827 aaKnown RBP5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 TBCELQ5QJ74 424 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 C16orf86Q6ZW13 317 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 TMEM151AQ8N4L1 468 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 NGLY1Q96IV0 654 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 CDK15Q96Q40 435 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 CEP89Q96ST8 783 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 FEZ1Q99689 392 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 ESYT1Q9BSJ8 1104 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 ZFYVE28Q9HCC9 887 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 FANCLQ9NW38 375 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 TMEM260Q9NX78 707 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 PPM1HQ9ULR3 514 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 EFR3BQ9Y2G0 817 aa5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 GPC6Q9Y625 555 aaPredicted RBP5.88□□□□□ -1.47
AC055878.1-201ENST00000531858 LILRA1O75019 489 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 ALDH1A1P00352 501 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 ETFBP38117 255 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 EIF4A3P38919 411 aaKnown RBP5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 TLR1Q15399 786 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 IER5Q5VY09 327 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 TRIM46Q7Z4K8 759 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 TICAM2Q86XR7 235 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 PRPF38AQ8NAV1 312 aaKnown RBP5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 STAG1Q8WVM7 1258 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 L3MBTL2Q969R5 705 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 TMEM74Q96NL1 305 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 ADAMTS1Q9UHI8 967 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 ZNF232Q9UNY5 417 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 HRH3Q9Y5N1 445 aa5.87□□□□□ -1.47
AC055878.1-201ENST00000531858 TGFBR3LH3BV60 316 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 RNF225M0QZC1 329 aaPredicted RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 CAPN5O15484 640 aaPredicted RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 GDF11O95390 407 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 STAU1O95793 577 aaKnown RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 GYS2P54840 703 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 IFRD2Q12894 506 aaPredicted RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 RC3H1Q5TC82 1133 aaKnown RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 CCSAPQ6IQ19 270 aaPredicted RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 NBPF10Q6P3W6 841 aaKnown RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 ZNF784Q8NCA9 323 aaPredicted RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 EPS8L3Q8TE67 593 aaKnown RBP5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 CPLX3Q8WVH0 158 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 PMEPA1Q969W9 287 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 C8orf48Q96LL4 319 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 BCO2Q9BYV7 579 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 PHACTR1Q9C0D0 580 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 SUV39H2Q9H5I1 410 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 GINM1Q9NU53 330 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 KLK14Q9P0G3 267 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 TRAK1Q9UPV9 953 aa5.86□□□□□ -1.47
AC055878.1-201ENST00000531858 PRC1O43663 620 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 IL2RAP01589 272 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 GSK3AP49840 483 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 TBX4P57082 545 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 RASGRF1Q13972 1273 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 NXPE4Q6UWF7 544 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 KRT26Q7Z3Y9 468 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 GALNT12Q8IXK2 581 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 ZNF295-AS1Q8N0V1 137 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 ZNF296Q8WUU4 475 aaPredicted RBP5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 CNKSR1Q969H4 720 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 ZFYVE1Q9HBF4 777 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 PGPEP1Q9NXJ5 209 aa5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 TTF2Q9UNY4 1162 aaKnown RBP5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 SUPT16HQ9Y5B9 1047 aaKnown RBP5.85□□□□□ -1.47
AC055878.1-201ENST00000531858 ROBO2Q9HCK4 1378 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 FAM221BA6H8Z2 402 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 PHACTR2O75167 634 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 PEX14O75381 377 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 MICAL2O94851 1124 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 VSIG8P0DPA2 414 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 MASP1P48740 699 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 RASSF7Q02833 373 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 CLN3Q13286 438 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 PCNX4Q63HM2 1172 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 SV2BQ7L1I2 683 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 FERMT3Q86UX7 667 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 CCDC146Q8IYE0 955 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 CCDC116Q8IYX3 515 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 JMYQ8N9B5 988 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 OR6P1Q8NGX9 317 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 ZNF526Q8TF50 670 aaPredicted RBP5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 ZDHHC1Q8WTX9 485 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 JDP2Q8WYK2 163 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 SRRTQ9BXP5 876 aaKnown RBP5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 NIFKQ9BYG3 293 aaKnown RBP5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 UBA5Q9GZZ9 404 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 C11orf16Q9NQ32 467 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 TMPRSS4Q9NRS4 437 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 CABP1Q9NZU7 370 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 PLAAQ9Y263 795 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 HCN4Q9Y3Q4 1203 aa5.84□□□□□ -1.47
AC055878.1-201ENST00000531858 GREM1O60565 184 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms