RNA–Protein interactions for RNA: ENST00000531648.5

C11orf49-217, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-217ENST00000531648 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
C11orf49-217ENST00000531648 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 GPC2Q8N158 579 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 DDX60Q8IY21 1712 aaKnown RBP12.42□□□□□ -0.42
C11orf49-217ENST00000531648 COL4A1P02462 1669 aa12.42□□□□□ -0.42
C11orf49-217ENST00000531648 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
C11orf49-217ENST00000531648 PLIN1O60240 522 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 TAF1P21675 1872 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 CCT4P50991 539 aaKnown RBP12.41□□□□□ -0.42
C11orf49-217ENST00000531648 EAPPQ56P03 285 aaPredicted RBP12.41□□□□□ -0.42
C11orf49-217ENST00000531648 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
C11orf49-217ENST00000531648 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
C11orf49-217ENST00000531648 ARHGAP45Q92619 1136 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 BICC1Q9H694 974 aaKnown RBP12.41□□□□□ -0.42
C11orf49-217ENST00000531648 TNNQ9UQP3 1299 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 RTL9Q8NET4 1388 aa12.41□□□□□ -0.42
C11orf49-217ENST00000531648 UTYO14607 1347 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 XDHP47989 1333 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 IQCA1LA6NCM1 817 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 TAF5LO75529 589 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 EPS15P42566 896 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 TNIP1Q15025 636 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 LDHAL6AQ6ZMR3 332 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
C11orf49-217ENST00000531648 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
C11orf49-217ENST00000531648 CNNM1Q9NRU3 951 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 HACL1Q9UJ83 578 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 COL4A5P29400 1685 aa12.4□□□□□ -0.42
C11orf49-217ENST00000531648 LAMB2P55268 1798 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 SNAP23O00161 211 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 ECE2O60344 883 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 LMOD1P29536 600 aaPredicted RBP12.39□□□□□ -0.43
C11orf49-217ENST00000531648 EPHX2P34913 555 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 KCNJ4P48050 445 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 CHRNDQ07001 517 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
C11orf49-217ENST00000531648 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
C11orf49-217ENST00000531648 KIF16BQ96L93 1317 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 PSMD14O00487 310 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 TRIM27P14373 513 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 GMPSP49915 693 aaPredicted RBP12.38□□□□□ -0.43
C11orf49-217ENST00000531648 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 ANKRD44Q8N8A2 993 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
C11orf49-217ENST00000531648 LEMD3Q9Y2U8 911 aa12.38□□□□□ -0.43
C11orf49-217ENST00000531648 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 UBTFL1P0CB47 393 aaPredicted RBP12.37□□□□□ -0.43
C11orf49-217ENST00000531648 HSPA6P17066 643 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 SCNN1DP51172 638 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 FSTL1Q12841 308 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 ZKSCAN2Q63HK3 967 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
C11orf49-217ENST00000531648 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 KLHDC4Q8TBB5 520 aa12.37□□□□□ -0.43
C11orf49-217ENST00000531648 KLRK1P26718 216 aa12.36□□□□□ -0.43
C11orf49-217ENST00000531648 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
C11orf49-217ENST00000531648 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
C11orf49-217ENST00000531648 MEIS3Q99687 375 aa12.36□□□□□ -0.43
C11orf49-217ENST00000531648 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
C11orf49-217ENST00000531648 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
C11orf49-217ENST00000531648 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
C11orf49-217ENST00000531648 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
C11orf49-217ENST00000531648 SHTN1A0MZ66 631 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 HTRA3P83110 453 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
C11orf49-217ENST00000531648 PNMA8AQ86V59 439 aaPredicted RBP12.35□□□□□ -0.43
C11orf49-217ENST00000531648 LDHDQ86WU2 507 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 FBXW7Q969H0 707 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
C11orf49-217ENST00000531648 RIPOR2Q9Y4F9 1068 aa12.35□□□□□ -0.43
C11orf49-217ENST00000531648 H7C1D1 291 aa12.34□□□□□ -0.43
C11orf49-217ENST00000531648 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
C11orf49-217ENST00000531648 PODNQ7Z5L7 613 aa12.34□□□□□ -0.43
C11orf49-217ENST00000531648 MXD3Q9BW11 206 aa12.34□□□□□ -0.43
C11orf49-217ENST00000531648 DUOX1Q9NRD9 1551 aa12.34□□□□□ -0.43
C11orf49-217ENST00000531648 USP17L3A6NCW0 530 aa12.33□□□□□ -0.44
C11orf49-217ENST00000531648 USP17L4A6NCW7 530 aa12.33□□□□□ -0.44
C11orf49-217ENST00000531648 GNAI3P08754 354 aa12.33□□□□□ -0.44
C11orf49-217ENST00000531648 VIL1P09327 827 aaKnown RBP12.33□□□□□ -0.44
C11orf49-217ENST00000531648 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
C11orf49-217ENST00000531648 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
C11orf49-217ENST00000531648 SAMD7Q7Z3H4 446 aa12.33□□□□□ -0.44
C11orf49-217ENST00000531648 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
C11orf49-217ENST00000531648 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
C11orf49-217ENST00000531648 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
C11orf49-217ENST00000531648 CNTROBQ8N137 903 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms