RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TRIP4Q15650 581 aaPredicted RBP8.24□□□□□ -1.09
USP47-211ENST00000531513 ETFBKMTQ8IXQ9 262 aa8.24□□□□□ -1.09
USP47-211ENST00000531513 AKTIPQ9H8T0 292 aa8.24□□□□□ -1.09
USP47-211ENST00000531513 PRMT3O60678 531 aa8.23□□□□□ -1.09
USP47-211ENST00000531513 ALX3O95076 343 aa8.23□□□□□ -1.09
USP47-211ENST00000531513 DZIP1LQ8IYY4 767 aaKnown RBP8.23□□□□□ -1.09
USP47-211ENST00000531513 IL22RA1Q8N6P7 574 aa8.23□□□□□ -1.09
USP47-211ENST00000531513 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
USP47-211ENST00000531513 RNF112Q9ULX5 631 aa8.23□□□□□ -1.09
USP47-211ENST00000531513 TRIM33Q9UPN9 1127 aa8.23□□□□□ -1.09
USP47-211ENST00000531513 F8W735 103 aaPredicted RBP8.22□□□□□ -1.09
USP47-211ENST00000531513 SWI5Q1ZZU3 235 aa8.22□□□□□ -1.09
USP47-211ENST00000531513 SAP130Q9H0E3 1048 aa8.22□□□□□ -1.09
USP47-211ENST00000531513 ACIN1Q9UKV3 1341 aaKnown RBP8.22□□□□□ -1.09
USP47-211ENST00000531513 SETDB1Q15047 1291 aa8.21□□□□□ -1.1
USP47-211ENST00000531513 OCLNQ16625 522 aa8.21□□□□□ -1.1
USP47-211ENST00000531513 FAM26DQ5JW98 314 aa8.21□□□□□ -1.1
USP47-211ENST00000531513 NLRP13Q86W25 1043 aa8.21□□□□□ -1.1
USP47-211ENST00000531513 RBSNQ9H1K0 784 aa8.21□□□□□ -1.1
USP47-211ENST00000531513 SRA1Q9HD15 236 aaKnown RBP8.21□□□□□ -1.1
USP47-211ENST00000531513 ZNF777Q9ULD5 760 aaPredicted RBP8.21□□□□□ -1.1
USP47-211ENST00000531513 ZMIZ1Q9ULJ6 1067 aa8.21□□□□□ -1.1
USP47-211ENST00000531513 C16orf46Q6P387 395 aa8.2□□□□□ -1.1
USP47-211ENST00000531513 TMEM130Q8N3G9 435 aa8.2□□□□□ -1.1
USP47-211ENST00000531513 GOLGA2P5Q9HBQ8 144 aa8.2□□□□□ -1.1
USP47-211ENST00000531513 FSTP19883 344 aa8.19□□□□□ -1.1
USP47-211ENST00000531513 Q6ZS46 218 aa8.19□□□□□ -1.1
USP47-211ENST00000531513 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
USP47-211ENST00000531513 STK32AQ8WU08 396 aa8.19□□□□□ -1.1
USP47-211ENST00000531513 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
USP47-211ENST00000531513 BRD2P25440 801 aaKnown RBP8.18□□□□□ -1.1
USP47-211ENST00000531513 FAM69CQ0P6D2 419 aa8.18□□□□□ -1.1
USP47-211ENST00000531513 AGGF1Q8N302 714 aaeCLIP8.18□□□□□ -1.1
USP47-211ENST00000531513 MKNK1Q9BUB5 465 aa8.18□□□□□ -1.1
USP47-211ENST00000531513 UBAP1LF5GYI3 381 aa8.17□□□□□ -1.1
USP47-211ENST00000531513 COL13A1Q5TAT6 717 aaPredicted RBP8.17□□□□□ -1.1
USP47-211ENST00000531513 CAPN12Q6ZSI9 719 aa8.17□□□□□ -1.1
USP47-211ENST00000531513 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
USP47-211ENST00000531513 GLB1P16278 677 aa8.16□□□□□ -1.1
USP47-211ENST00000531513 ATP11AP98196 1134 aa8.16□□□□□ -1.1
USP47-211ENST00000531513 ELOAQ14241 798 aaKnown RBP8.16□□□□□ -1.1
USP47-211ENST00000531513 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.16□□□□□ -1.1
USP47-211ENST00000531513 OR13H1Q8NG92 308 aa8.16□□□□□ -1.1
USP47-211ENST00000531513 COL26A1Q96A83 441 aa8.16□□□□□ -1.1
USP47-211ENST00000531513 WISP1O95388 367 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 TXNDC11Q6PKC3 985 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 GALNT11Q8NCW6 608 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 PIK3R5Q8WYR1 880 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 MUC3BQ9H195 1237 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 PCMTD2Q9NV79 361 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 CXXC1Q9P0U4 656 aaPredicted RBP8.15□□□□□ -1.1
USP47-211ENST00000531513 PPME1Q9Y570 386 aa8.15□□□□□ -1.1
USP47-211ENST00000531513 LINC01387J3KSC0 135 aa8.14□□□□□ -1.11
USP47-211ENST00000531513 SSTR4P31391 388 aa8.14□□□□□ -1.11
USP47-211ENST00000531513 ZAP70P43403 619 aa8.14□□□□□ -1.11
USP47-211ENST00000531513 CACTIN-AS1Q8N1I8 211 aa8.14□□□□□ -1.11
USP47-211ENST00000531513 LACRTQ9GZZ8 138 aa8.14□□□□□ -1.11
USP47-211ENST00000531513 HYAL2Q12891 473 aa8.13□□□□□ -1.11
USP47-211ENST00000531513 NAA30Q147X3 362 aaPredicted RBP8.13□□□□□ -1.11
USP47-211ENST00000531513 UBL7Q96S82 380 aaPredicted RBP8.13□□□□□ -1.11
USP47-211ENST00000531513 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
USP47-211ENST00000531513 CEP135Q66GS9 1140 aa8.12□□□□□ -1.11
USP47-211ENST00000531513 ADAMTSL4Q6UY14 1074 aa8.12□□□□□ -1.11
USP47-211ENST00000531513 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
USP47-211ENST00000531513 RAXQ9Y2V3 346 aa8.12□□□□□ -1.11
USP47-211ENST00000531513 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.11□□□□□ -1.11
USP47-211ENST00000531513 TM4SF5O14894 197 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 SMNDC1O75940 238 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP47-211ENST00000531513 CD68P34810 354 aaPredicted RBP8.11□□□□□ -1.11
USP47-211ENST00000531513 CD97P48960 835 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 ACAD11Q709F0 780 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 CARD10Q9BWT7 1032 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 RASSF4Q9H2L5 321 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
USP47-211ENST00000531513 PTCD1O75127 700 aaKnown RBP8.1□□□□□ -1.11
USP47-211ENST00000531513 KIF4AO95239 1232 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 CYP2E1P05181 493 aaPredicted RBP8.1□□□□□ -1.11
USP47-211ENST00000531513 CDC27P30260 824 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 CDC25BP30305 580 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 SCNN1AP37088 669 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 TMEM164Q5U3C3 297 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 TTC39BQ5VTQ0 682 aaPredicted RBP8.1□□□□□ -1.11
USP47-211ENST00000531513 MCTP1Q6DN14 999 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 SPACA7Q96KW9 195 aa8.1□□□□□ -1.11
USP47-211ENST00000531513 FNDC3AQ9Y2H6 1198 aaKnown RBP8.1□□□□□ -1.11
USP47-211ENST00000531513 ZBTB39O15060 712 aa8.09□□□□□ -1.11
USP47-211ENST00000531513 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
USP47-211ENST00000531513 SRPK2P78362 688 aaKnown RBP8.09□□□□□ -1.11
USP47-211ENST00000531513 ARMC10Q8N2F6 343 aa8.09□□□□□ -1.11
USP47-211ENST00000531513 ABI2Q9NYB9 513 aaPredicted RBP8.09□□□□□ -1.11
USP47-211ENST00000531513 STIM2Q9P246 746 aa8.09□□□□□ -1.11
USP47-211ENST00000531513 STOML1Q9UBI4 398 aa8.09□□□□□ -1.11
USP47-211ENST00000531513 GSC2O15499 205 aa8.08□□□□□ -1.12
USP47-211ENST00000531513 ATG7O95352 703 aa8.08□□□□□ -1.12
USP47-211ENST00000531513 TGFB1P01137 390 aa8.08□□□□□ -1.12
USP47-211ENST00000531513 EPHA1P21709 976 aa8.08□□□□□ -1.12
USP47-211ENST00000531513 CEP41Q9BYV8 373 aa8.08□□□□□ -1.12
USP47-211ENST00000531513 FSCN2O14926 492 aa8.07□□□□□ -1.12
USP47-211ENST00000531513 DHX15O43143 795 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms