RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ADARB2Q9NS39 739 aaKnown RBP13.91□□□□□ -0.18
CAPN1-221ENST00000531068 C9orf78Q9NZ63 289 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-221ENST00000531068 MINPP1Q9UNW1 487 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 H7C1D1 291 aa13.9□□□□□ -0.18
CAPN1-221ENST00000531068 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-221ENST00000531068 CT47B1P0C2W7 299 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-221ENST00000531068 ITGA6P23229 1130 aa13.9□□□□□ -0.18
CAPN1-221ENST00000531068 GMPSP49915 693 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-221ENST00000531068 HTRA3P83110 453 aa13.9□□□□□ -0.18
CAPN1-221ENST00000531068 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
CAPN1-221ENST00000531068 MRPL50Q8N5N7 158 aaKnown RBP13.9□□□□□ -0.18
CAPN1-221ENST00000531068 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
CAPN1-221ENST00000531068 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
CAPN1-221ENST00000531068 ANKRD18BA2A2Z9 1011 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 YDJCA8MPS7 323 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 GRM8O00222 908 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 ECE2O60344 883 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 RPS12P25398 132 aaKnown RBP13.89□□□□□ -0.19
CAPN1-221ENST00000531068 IFIT5Q13325 482 aaKnown RBP13.89□□□□□ -0.19
CAPN1-221ENST00000531068 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 DPF2Q92785 391 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 ANKRD2Q9GZV1 360 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 DBNDD1Q9H9R9 158 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
CAPN1-221ENST00000531068 LEMD3Q9Y2U8 911 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 PTPRCP08575 1304 aa13.89□□□□□ -0.19
CAPN1-221ENST00000531068 MAP1SQ66K74 1059 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-221ENST00000531068 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
CAPN1-221ENST00000531068 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 PSMD14O00487 310 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 FOXO4P98177 505 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 PODNQ7Z5L7 613 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 ZC3H15Q8WU90 426 aaKnown RBP13.87□□□□□ -0.19
CAPN1-221ENST00000531068 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 CHMP3Q9Y3E7 222 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 COL4A5P29400 1685 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
CAPN1-221ENST00000531068 CEP350Q5VT06 3117 aa13.86□□□□□ -0.19
CAPN1-221ENST00000531068 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
CAPN1-221ENST00000531068 VIL1P09327 827 aaKnown RBP13.86□□□□□ -0.19
CAPN1-221ENST00000531068 CCT4P50991 539 aaKnown RBP13.86□□□□□ -0.19
CAPN1-221ENST00000531068 LMBR1LQ6UX01 489 aa13.86□□□□□ -0.19
CAPN1-221ENST00000531068 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
CAPN1-221ENST00000531068 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-221ENST00000531068 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
CAPN1-221ENST00000531068 MICALL2Q8IY33 904 aa13.85□□□□□ -0.19
CAPN1-221ENST00000531068 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
CAPN1-221ENST00000531068 KCNQ5Q9NR82 932 aa13.85□□□□□ -0.19
CAPN1-221ENST00000531068 SMC4Q9NTJ3 1288 aa13.85□□□□□ -0.19
CAPN1-221ENST00000531068 PGAP2Q9UHJ9 254 aa13.85□□□□□ -0.19
CAPN1-221ENST00000531068 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-221ENST00000531068 DICER1Q9UPY3 1922 aaKnown RBP13.84□□□□□ -0.19
CAPN1-221ENST00000531068 USP17L3A6NCW0 530 aa13.84□□□□□ -0.19
CAPN1-221ENST00000531068 USP17L4A6NCW7 530 aa13.84□□□□□ -0.19
CAPN1-221ENST00000531068 KCNJ4P48050 445 aa13.84□□□□□ -0.19
CAPN1-221ENST00000531068 USP17L1Q7RTZ2 530 aa13.84□□□□□ -0.19
CAPN1-221ENST00000531068 AGBL3Q8NEM8 1001 aa13.84□□□□□ -0.19
CAPN1-221ENST00000531068 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
CAPN1-221ENST00000531068 CHRNDQ07001 517 aa13.83□□□□□ -0.2
CAPN1-221ENST00000531068 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
CAPN1-221ENST00000531068 CDC37L1Q7L3B6 337 aa13.83□□□□□ -0.2
CAPN1-221ENST00000531068 UTYO14607 1347 aa13.83□□□□□ -0.2
CAPN1-221ENST00000531068 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
CAPN1-221ENST00000531068 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-221ENST00000531068 EPHA10Q5JZY3 1008 aa13.82□□□□□ -0.2
CAPN1-221ENST00000531068 RSBN1LQ6PCB5 846 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-221ENST00000531068 SUPT16HQ9Y5B9 1047 aaKnown RBP13.82□□□□□ -0.2
CAPN1-221ENST00000531068 CACNA1SQ13698 1873 aa13.82□□□□□ -0.2
CAPN1-221ENST00000531068 CCDC88AQ3V6T2 1871 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 MMP14P50281 582 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 BRPF1P55201 1214 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 DEFB115Q30KQ5 88 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 RBM26Q5T8P6 1007 aaKnown RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 STRIP1Q5VSL9 837 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 SAMD7Q7Z3H4 446 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 SUCLG2Q96I99 432 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 API5Q9BZZ5 524 aaKnown RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 ABT1Q9ULW3 272 aaKnown RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 HDAC5Q9UQL6 1122 aa13.81□□□□□ -0.2
CAPN1-221ENST00000531068 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
CAPN1-221ENST00000531068 SCN4AP35499 1836 aa13.8□□□□□ -0.2
CAPN1-221ENST00000531068 DUOX1Q9NRD9 1551 aa13.8□□□□□ -0.2
CAPN1-221ENST00000531068 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-221ENST00000531068 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
CAPN1-221ENST00000531068 TBC1D10BQ4KMP7 808 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-221ENST00000531068 ERICH6BQ5W0A0 696 aa13.8□□□□□ -0.2
CAPN1-221ENST00000531068 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
CAPN1-221ENST00000531068 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
CAPN1-221ENST00000531068 DCPSQ96C86 337 aaKnown RBP13.8□□□□□ -0.2
CAPN1-221ENST00000531068 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
CAPN1-221ENST00000531068 SHTN1A0MZ66 631 aa13.79□□□□□ -0.2
CAPN1-221ENST00000531068 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms