RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 DGKGP49619 791 aa9.48□□□□□ -0.89
CHEK1-211ENST00000531062 HYAL2Q12891 473 aa9.48□□□□□ -0.89
CHEK1-211ENST00000531062 LINC00114Q6XXX2 140 aa9.48□□□□□ -0.89
CHEK1-211ENST00000531062 NCAPG2Q86XI2 1143 aa9.48□□□□□ -0.89
CHEK1-211ENST00000531062 MICALL1Q8N3F8 863 aa9.48□□□□□ -0.89
CHEK1-211ENST00000531062 TNFRSF21O75509 655 aa9.47□□□□□ -0.89
CHEK1-211ENST00000531062 EIF2AK2P19525 551 aaKnown RBP9.47□□□□□ -0.89
CHEK1-211ENST00000531062 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
CHEK1-211ENST00000531062 SUZ12Q15022 739 aaKnown RBP9.47□□□□□ -0.89
CHEK1-211ENST00000531062 CCDC27Q2M243 656 aa9.47□□□□□ -0.89
CHEK1-211ENST00000531062 C1orf127Q8N9H9 656 aa9.47□□□□□ -0.89
CHEK1-211ENST00000531062 NIF3L1Q9GZT8 377 aa9.47□□□□□ -0.89
CHEK1-211ENST00000531062 CNTN3Q9P232 1028 aa9.47□□□□□ -0.89
CHEK1-211ENST00000531062 FOXD3Q9UJU5 478 aaPredicted RBP9.47□□□□□ -0.89
CHEK1-211ENST00000531062 NAGPAQ9UK23 515 aa9.47□□□□□ -0.89
CHEK1-211ENST00000531062 LOC102724428A0A0B4J2F2 783 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 SIK1P57059 783 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
CHEK1-211ENST00000531062 COL9A3Q14050 684 aaPredicted RBP9.46□□□□□ -0.9
CHEK1-211ENST00000531062 ELMSAN1Q6PJG2 1045 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 TMC7Q7Z402 723 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 TTC9Q92623 222 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 FRRS1LQ9P0K9 344 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 KANSL3Q9P2N6 904 aa9.46□□□□□ -0.9
CHEK1-211ENST00000531062 J3QW42 95 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 KIF4AO95239 1232 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 ALBP02768 609 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
CHEK1-211ENST00000531062 TMCO4Q5TGY1 634 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 BEND7Q8N7W2 519 aaPredicted RBP9.45□□□□□ -0.9
CHEK1-211ENST00000531062 NUDT8Q8WV74 236 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 CHRDQ9H2X0 955 aa9.45□□□□□ -0.9
CHEK1-211ENST00000531062 RGS9O75916 674 aaPredicted RBP9.44□□□□□ -0.9
CHEK1-211ENST00000531062 PLCB3Q01970 1234 aa9.44□□□□□ -0.9
CHEK1-211ENST00000531062 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
CHEK1-211ENST00000531062 PSAPL1Q6NUJ1 521 aa9.44□□□□□ -0.9
CHEK1-211ENST00000531062 ILDR2Q71H61 639 aa9.44□□□□□ -0.9
CHEK1-211ENST00000531062 SCARF2Q96GP6 870 aaPredicted RBP9.44□□□□□ -0.9
CHEK1-211ENST00000531062 PERM1Q5SV97 790 aa9.43□□□□□ -0.9
CHEK1-211ENST00000531062 ASB16Q96NS5 453 aa9.43□□□□□ -0.9
CHEK1-211ENST00000531062 LPIN3Q9BQK8 851 aa9.43□□□□□ -0.9
CHEK1-211ENST00000531062 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
CHEK1-211ENST00000531062 SALL4Q9UJQ4 1053 aa9.43□□□□□ -0.9
CHEK1-211ENST00000531062 AMOTL2Q9Y2J4 779 aa9.43□□□□□ -0.9
CHEK1-211ENST00000531062 CNTNAP5Q8WYK1 1306 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 M0R082 166 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 EREGO14944 169 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 GPR182O15218 404 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 ZNF417Q8TAU3 575 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 ALKBH8Q96BT7 664 aaKnown RBP9.42□□□□□ -0.9
CHEK1-211ENST00000531062 ZNF587Q96SQ5 575 aaPredicted RBP9.42□□□□□ -0.9
CHEK1-211ENST00000531062 ZFYVE28Q9HCC9 887 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
CHEK1-211ENST00000531062 LILRB5O75023 590 aa9.41□□□□□ -0.9
CHEK1-211ENST00000531062 CPNE3O75131 537 aaKnown RBP9.41□□□□□ -0.9
CHEK1-211ENST00000531062 ORC1Q13415 861 aa9.41□□□□□ -0.9
CHEK1-211ENST00000531062 GRIK5Q16478 980 aa9.41□□□□□ -0.9
CHEK1-211ENST00000531062 CEP120Q8N960 986 aa9.41□□□□□ -0.9
CHEK1-211ENST00000531062 SMG9Q9H0W8 520 aaKnown RBP9.41□□□□□ -0.9
CHEK1-211ENST00000531062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
CHEK1-211ENST00000531062 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
CHEK1-211ENST00000531062 PIK3R2O00459 728 aa9.4□□□□□ -0.9
CHEK1-211ENST00000531062 EDN3P14138 238 aa9.4□□□□□ -0.9
CHEK1-211ENST00000531062 MAPK8P45983 427 aa9.4□□□□□ -0.9
CHEK1-211ENST00000531062 GSK3AP49840 483 aa9.4□□□□□ -0.9
CHEK1-211ENST00000531062 PLD4Q96BZ4 506 aa9.4□□□□□ -0.9
CHEK1-211ENST00000531062 GNB5O14775 395 aa9.39□□□□□ -0.91
CHEK1-211ENST00000531062 POLR3DP05423 398 aaPredicted RBP9.39□□□□□ -0.91
CHEK1-211ENST00000531062 NID1P14543 1247 aa9.39□□□□□ -0.91
CHEK1-211ENST00000531062 AFF1P51825 1210 aaKnown RBP9.39□□□□□ -0.91
CHEK1-211ENST00000531062 DSC3Q14574 896 aa9.39□□□□□ -0.91
CHEK1-211ENST00000531062 C8orf86Q6ZUL3 223 aa9.39□□□□□ -0.91
CHEK1-211ENST00000531062 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
CHEK1-211ENST00000531062 ANKRD33BA6NCL7 494 aa9.38□□□□□ -0.91
CHEK1-211ENST00000531062 EIF1AYO14602 144 aaKnown RBP9.38□□□□□ -0.91
CHEK1-211ENST00000531062 TREHO43280 583 aa9.38□□□□□ -0.91
CHEK1-211ENST00000531062 SMNDC1O75940 238 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHEK1-211ENST00000531062 KCNMA1Q12791 1236 aa9.38□□□□□ -0.91
CHEK1-211ENST00000531062 CEP135Q66GS9 1140 aa9.38□□□□□ -0.91
CHEK1-211ENST00000531062 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
CHEK1-211ENST00000531062 CSRNP1Q96S65 589 aa9.38□□□□□ -0.91
CHEK1-211ENST00000531062 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
CHEK1-211ENST00000531062 GDF6Q6KF10 455 aaPredicted RBP9.37□□□□□ -0.91
CHEK1-211ENST00000531062 PNMA6FA0A0J9YX94 578 aa9.36□□□□□ -0.91
CHEK1-211ENST00000531062 NFKBIEO00221 500 aa9.36□□□□□ -0.91
CHEK1-211ENST00000531062 ATP11AP98196 1134 aa9.36□□□□□ -0.91
CHEK1-211ENST00000531062 USPL1Q5W0Q7 1092 aa9.36□□□□□ -0.91
CHEK1-211ENST00000531062 RASSF4Q9H2L5 321 aa9.36□□□□□ -0.91
CHEK1-211ENST00000531062 RNF225M0QZC1 329 aaPredicted RBP9.35□□□□□ -0.91
CHEK1-211ENST00000531062 OSMRQ99650 979 aa9.35□□□□□ -0.91
CHEK1-211ENST00000531062 PBX4Q9BYU1 374 aa9.35□□□□□ -0.91
CHEK1-211ENST00000531062 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 GADD45BO75293 160 aaPredicted RBP9.34□□□□□ -0.91
CHEK1-211ENST00000531062 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
CHEK1-211ENST00000531062 GALNT12Q8IXK2 581 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 CACTIN-AS1Q8N1I8 211 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 LACRTQ9GZZ8 138 aa9.34□□□□□ -0.91
CHEK1-211ENST00000531062 SUV39H2Q9H5I1 410 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms