RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 ZMYM1Q5SVZ6 1142 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 GTF3C6Q969F1 213 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 AKAP2Q9Y2D5 859 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 A0A1B0GUL7 405 aa20.42■□□□□ 0.86
BRCA2-204ENST00000530893 MCM5P33992 734 aa20.42■□□□□ 0.86
BRCA2-204ENST00000530893 COL9A3Q14050 684 aaPredicted RBP20.42■□□□□ 0.86
BRCA2-204ENST00000530893 KIF6Q6ZMV9 814 aa20.42■□□□□ 0.86
BRCA2-204ENST00000530893 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
BRCA2-204ENST00000530893 CEP126Q9P2H0 1117 aa20.42■□□□□ 0.86
BRCA2-204ENST00000530893 PCCAP05165 728 aaPredicted RBP20.41■□□□□ 0.86
BRCA2-204ENST00000530893 IFIT1P09914 478 aaKnown RBP20.41■□□□□ 0.86
BRCA2-204ENST00000530893 LRRC24Q50LG9 513 aa20.41■□□□□ 0.86
BRCA2-204ENST00000530893 CCDC129Q6ZRS4 1044 aa20.41■□□□□ 0.86
BRCA2-204ENST00000530893 TCEANC2Q96MN5 208 aa20.41■□□□□ 0.86
BRCA2-204ENST00000530893 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
BRCA2-204ENST00000530893 STARD3NLO95772 234 aa20.41■□□□□ 0.86
BRCA2-204ENST00000530893 RNF214Q8ND24 703 aa20.41■□□□□ 0.86
BRCA2-204ENST00000530893 ZNF335Q9H4Z2 1342 aaPredicted RBP20.41■□□□□ 0.86
BRCA2-204ENST00000530893 Q6ZUG5 572 aa20.4■□□□□ 0.86
BRCA2-204ENST00000530893 CDC37L1Q7L3B6 337 aa20.4■□□□□ 0.86
BRCA2-204ENST00000530893 LLPHQ9BRT6 129 aaKnown RBP20.4■□□□□ 0.86
BRCA2-204ENST00000530893 SCAND2PQ9GZW5 306 aaPredicted RBP20.4■□□□□ 0.86
BRCA2-204ENST00000530893 ABCC12Q96J65 1359 aa20.4■□□□□ 0.86
BRCA2-204ENST00000530893 RNF113AO15541 343 aaKnown RBP20.39■□□□□ 0.86
BRCA2-204ENST00000530893 CCDC158Q5M9N0 1113 aa20.39■□□□□ 0.85
BRCA2-204ENST00000530893 DHX32Q7L7V1 743 aaKnown RBP20.39■□□□□ 0.85
BRCA2-204ENST00000530893 ZBTB38Q8NAP3 1195 aaPredicted RBP20.39■□□□□ 0.85
BRCA2-204ENST00000530893 CHMP4CQ96CF2 233 aa20.39■□□□□ 0.85
BRCA2-204ENST00000530893 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.85
BRCA2-204ENST00000530893 CSF1RP07333 972 aa20.38■□□□□ 0.85
BRCA2-204ENST00000530893 LAMA4Q16363 1823 aa20.38■□□□□ 0.85
BRCA2-204ENST00000530893 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
BRCA2-204ENST00000530893 ZFYP08048 801 aaPredicted RBP20.37■□□□□ 0.85
BRCA2-204ENST00000530893 PIGBQ92521 554 aa20.37■□□□□ 0.85
BRCA2-204ENST00000530893 AGXT2Q9BYV1 514 aa20.37■□□□□ 0.85
BRCA2-204ENST00000530893 ANO8Q9HCE9 1232 aaPredicted RBP20.37■□□□□ 0.85
BRCA2-204ENST00000530893 LRP6O75581 1613 aa20.37■□□□□ 0.85
BRCA2-204ENST00000530893 ITGB4P16144 1822 aa20.37■□□□□ 0.85
BRCA2-204ENST00000530893 CHGBP05060 677 aa20.37■□□□□ 0.85
BRCA2-204ENST00000530893 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
BRCA2-204ENST00000530893 MAP3K15Q6ZN16 1313 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 ZNF500O60304 480 aaPredicted RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 HSPD1P10809 573 aaKnown RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 STK3Q13188 491 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 GIGYF2Q6Y7W6 1299 aaKnown RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 ZKSCAN5Q9Y2L8 839 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 MAST3O60307 1309 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 PFKFB2O60825 505 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 FGD1P98174 961 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 TTC6Q86TZ1 520 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 DNAJC10Q8IXB1 793 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 FUCA2Q9BTY2 467 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 ZSCAN16Q9H4T2 348 aaPredicted RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
BRCA2-204ENST00000530893 KIF3AQ9Y496 699 aa20.36■□□□□ 0.85
BRCA2-204ENST00000530893 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
BRCA2-204ENST00000530893 STOX1Q6ZVD7 989 aa20.35■□□□□ 0.85
BRCA2-204ENST00000530893 SMARCC2Q8TAQ2 1214 aa20.35■□□□□ 0.85
BRCA2-204ENST00000530893 NAP1L5Q96NT1 182 aaPredicted RBP20.35■□□□□ 0.85
BRCA2-204ENST00000530893 ASAP1Q9ULH1 1129 aa20.35■□□□□ 0.85
BRCA2-204ENST00000530893 CCDC9Q9Y3X0 531 aaKnown RBP20.35■□□□□ 0.85
BRCA2-204ENST00000530893 EXOSC10Q01780 885 aaKnown RBP20.34■□□□□ 0.85
BRCA2-204ENST00000530893 GORABQ5T7V8 394 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 FBXL16Q8N461 479 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 BRF1Q92994 677 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 COL14A1Q05707 1796 aaKnown RBP20.34■□□□□ 0.85
BRCA2-204ENST00000530893 DISP2A7MBM2 1401 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 HMGN5P82970 282 aaKnown RBP20.34■□□□□ 0.85
BRCA2-204ENST00000530893 TAF7LQ5H9L4 462 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 TTC39AQ5SRH9 613 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 FERMT3Q86UX7 667 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 XAGE2Q96GT9 111 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 CTNNA3Q9UI47 895 aa20.34■□□□□ 0.85
BRCA2-204ENST00000530893 PLCH1Q4KWH8 1693 aa20.33■□□□□ 0.85
BRCA2-204ENST00000530893 ANKRD36CQ5JPF3 1778 aa20.33■□□□□ 0.84
BRCA2-204ENST00000530893 BCL9O00512 1426 aa20.33■□□□□ 0.84
BRCA2-204ENST00000530893 E7EWF7 191 aa20.32■□□□□ 0.84
BRCA2-204ENST00000530893 SCRN1Q12765 414 aa20.32■□□□□ 0.84
BRCA2-204ENST00000530893 FAM89AQ96GI7 184 aa20.32■□□□□ 0.84
BRCA2-204ENST00000530893 SPATA32Q96LK8 384 aa20.32■□□□□ 0.84
BRCA2-204ENST00000530893 BTG4Q9NY30 223 aa20.32■□□□□ 0.84
BRCA2-204ENST00000530893 ZNF330Q9Y3S2 320 aaPredicted RBP20.32■□□□□ 0.84
BRCA2-204ENST00000530893 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.32■□□□□ 0.84
BRCA2-204ENST00000530893 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.32■□□□□ 0.84
BRCA2-204ENST00000530893 GOLGA6L4A6NEF3 574 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 H3BQV1 296 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 JAK2O60674 1132 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 DTNBO60941 627 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 OFD1O75665 1012 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
BRCA2-204ENST00000530893 IFFO2Q5TF58 517 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 NAA16Q6N069 864 aaPredicted RBP20.31■□□□□ 0.84
BRCA2-204ENST00000530893 ZNF274Q96GC6 653 aaPredicted RBP20.31■□□□□ 0.84
BRCA2-204ENST00000530893 FKBP4Q02790 459 aaKnown RBP eCLIP20.31■□□□□ 0.84
BRCA2-204ENST00000530893 RESTQ13127 1097 aa20.31■□□□□ 0.84
BRCA2-204ENST00000530893 LEO1Q8WVC0 666 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms