RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 TAF1P21675 1872 aa23.47■■□□□ 1.35
PSMC3-208ENST00000530887 FMR1Q06787 632 aaKnown RBP eCLIP23.47■■□□□ 1.35
PSMC3-208ENST00000530887 ANKIB1Q9P2G1 1089 aa23.47■■□□□ 1.35
PSMC3-208ENST00000530887 ZNF609O15014 1411 aa23.47■■□□□ 1.35
PSMC3-208ENST00000530887 MYD88Q99836 296 aa23.46■■□□□ 1.35
PSMC3-208ENST00000530887 METTL22Q9BUU2 404 aaPredicted RBP23.46■■□□□ 1.35
PSMC3-208ENST00000530887 ZNF408Q9H9D4 720 aa23.46■■□□□ 1.35
PSMC3-208ENST00000530887 RIMBP2O15034 1052 aa23.45■■□□□ 1.34
PSMC3-208ENST00000530887 VIL1P09327 827 aaKnown RBP23.45■■□□□ 1.34
PSMC3-208ENST00000530887 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.34
PSMC3-208ENST00000530887 KRT26Q7Z3Y9 468 aa23.45■■□□□ 1.34
PSMC3-208ENST00000530887 C2orf69Q8N8R5 385 aa23.45■■□□□ 1.34
PSMC3-208ENST00000530887 AGBL3Q8NEM8 1001 aa23.45■■□□□ 1.34
PSMC3-208ENST00000530887 ABHD8Q96I13 439 aa23.45■■□□□ 1.34
PSMC3-208ENST00000530887 CDC5LQ99459 802 aaKnown RBP23.45■■□□□ 1.34
PSMC3-208ENST00000530887 UFL1O94874 794 aa23.44■■□□□ 1.34
PSMC3-208ENST00000530887 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
PSMC3-208ENST00000530887 ANKRD18AQ8IVF6 992 aa23.44■■□□□ 1.34
PSMC3-208ENST00000530887 CCDC102AQ96A19 550 aa23.44■■□□□ 1.34
PSMC3-208ENST00000530887 PHAXQ9H814 394 aaKnown RBP23.44■■□□□ 1.34
PSMC3-208ENST00000530887 ZBTB12Q9Y330 459 aaPredicted RBP23.44■■□□□ 1.34
PSMC3-208ENST00000530887 XDHP47989 1333 aa23.43■■□□□ 1.34
PSMC3-208ENST00000530887 MMP14P50281 582 aa23.43■■□□□ 1.34
PSMC3-208ENST00000530887 HUNKP57058 714 aa23.43■■□□□ 1.34
PSMC3-208ENST00000530887 NCBP3Q53F19 620 aaKnown RBP23.43■■□□□ 1.34
PSMC3-208ENST00000530887 USP48Q86UV5 1035 aa23.43■■□□□ 1.34
PSMC3-208ENST00000530887 SULF1Q8IWU6 871 aa23.43■■□□□ 1.34
PSMC3-208ENST00000530887 STK31Q9BXU1 1019 aa23.43■■□□□ 1.34
PSMC3-208ENST00000530887 ATP2B4P23634 1241 aa23.42■■□□□ 1.34
PSMC3-208ENST00000530887 KIF4BQ2VIQ3 1234 aa23.42■■□□□ 1.34
PSMC3-208ENST00000530887 SAMD7Q7Z3H4 446 aa23.42■■□□□ 1.34
PSMC3-208ENST00000530887 PODNQ7Z5L7 613 aa23.42■■□□□ 1.34
PSMC3-208ENST00000530887 AOC2O75106 756 aa23.41■■□□□ 1.34
PSMC3-208ENST00000530887 CCDC27Q2M243 656 aa23.41■■□□□ 1.34
PSMC3-208ENST00000530887 TBC1D10BQ4KMP7 808 aaPredicted RBP23.41■■□□□ 1.34
PSMC3-208ENST00000530887 KSR2Q6VAB6 950 aa23.41■■□□□ 1.34
PSMC3-208ENST00000530887 REM2Q8IYK8 340 aaPredicted RBP23.41■■□□□ 1.34
PSMC3-208ENST00000530887 GBA2Q9HCG7 927 aaPredicted RBP23.41■■□□□ 1.34
PSMC3-208ENST00000530887 RTL9Q8NET4 1388 aa23.4■■□□□ 1.34
PSMC3-208ENST00000530887 ELL2O00472 640 aaPredicted RBP23.4■■□□□ 1.34
PSMC3-208ENST00000530887 DOK7Q18PE1 504 aa23.4■■□□□ 1.34
PSMC3-208ENST00000530887 RGMBQ6NW40 437 aa23.4■■□□□ 1.34
PSMC3-208ENST00000530887 RSBN1LQ6PCB5 846 aaPredicted RBP23.39■■□□□ 1.33
PSMC3-208ENST00000530887 SEC31BQ9NQW1 1179 aa23.39■■□□□ 1.33
PSMC3-208ENST00000530887 SAGE1Q9NXZ1 904 aa23.39■■□□□ 1.33
PSMC3-208ENST00000530887 ZNF280AP59817 542 aaPredicted RBP23.38■■□□□ 1.33
PSMC3-208ENST00000530887 FKBP1BP68106 108 aa23.38■■□□□ 1.33
PSMC3-208ENST00000530887 C8orf58Q8NAV2 365 aa23.38■■□□□ 1.33
PSMC3-208ENST00000530887 PITPNM2Q9BZ72 1349 aa23.37■■□□□ 1.33
PSMC3-208ENST00000530887 SHTN1A0MZ66 631 aa23.37■■□□□ 1.33
PSMC3-208ENST00000530887 CTSWP56202 376 aa23.37■■□□□ 1.33
PSMC3-208ENST00000530887 ZNF428Q96B54 188 aa23.37■■□□□ 1.33
PSMC3-208ENST00000530887 BSDC1Q9NW68 430 aaPredicted RBP23.37■■□□□ 1.33
PSMC3-208ENST00000530887 MAP3K2Q9Y2U5 619 aa23.37■■□□□ 1.33
PSMC3-208ENST00000530887 RBM26Q5T8P6 1007 aaKnown RBP23.36■■□□□ 1.33
PSMC3-208ENST00000530887 IL16Q14005 1332 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 MYO3BQ8WXR4 1341 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 PI4KAP2A4QPH2 592 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 USP17L3A6NCW0 530 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 USP17L4A6NCW7 530 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 USP17L1Q7RTZ2 530 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 PI4KAP1Q8N8J0 262 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 GGA3Q9NZ52 723 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 MED23Q9ULK4 1368 aa23.35■■□□□ 1.33
PSMC3-208ENST00000530887 POLR2AP24928 1970 aaKnown RBP23.34■■□□□ 1.33
PSMC3-208ENST00000530887 PSME4Q14997 1843 aa23.34■■□□□ 1.33
PSMC3-208ENST00000530887 USP17L8P0C7I0 530 aa23.34■■□□□ 1.33
PSMC3-208ENST00000530887 ZNF157P51786 506 aaPredicted RBP23.33■■□□□ 1.33
PSMC3-208ENST00000530887 OGFOD1Q8N543 542 aa23.33■■□□□ 1.33
PSMC3-208ENST00000530887 KCNQ5Q9NR82 932 aa23.33■■□□□ 1.33
PSMC3-208ENST00000530887 MYH3P11055 1940 aa23.33■■□□□ 1.32
PSMC3-208ENST00000530887 SCN9AQ15858 1988 aa23.32■■□□□ 1.32
PSMC3-208ENST00000530887 IGHMBP2P38935 993 aaKnown RBP23.32■■□□□ 1.32
PSMC3-208ENST00000530887 TTLL11Q8NHH1 800 aa23.32■■□□□ 1.32
PSMC3-208ENST00000530887 MYH16Q9H6N6 1097 aa23.32■■□□□ 1.32
PSMC3-208ENST00000530887 LEMD3Q9Y2U8 911 aa23.32■■□□□ 1.32
PSMC3-208ENST00000530887 CACNA1FO60840 1977 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 ADM5C9JUS6 153 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 EGFRP00533 1210 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 TWISTNBQ3B726 338 aaPredicted RBP23.31■■□□□ 1.32
PSMC3-208ENST00000530887 GMLQ99445 158 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 ANKRD2Q9GZV1 360 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 COA1Q9GZY4 146 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 MYOZ2Q9NPC6 264 aa23.31■■□□□ 1.32
PSMC3-208ENST00000530887 COL4A1P02462 1669 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 CCDC85CA6NKD9 419 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 NEURL1BA8MQ27 555 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 IGKV5-2P06315 115 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 SLC10A3P09131 477 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 RGS19P49795 217 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 SCARF1Q14162 830 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 CDCA5Q96FF9 252 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 PLA2G12BQ9BX93 195 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 MINPP1Q9UNW1 487 aa23.3■■□□□ 1.32
PSMC3-208ENST00000530887 FAM155AB1AL88 458 aaPredicted RBP23.29■■□□□ 1.32
PSMC3-208ENST00000530887 STRIP1Q5VSL9 837 aa23.29■■□□□ 1.32
PSMC3-208ENST00000530887 WWC1Q8IX03 1113 aa23.29■■□□□ 1.32
PSMC3-208ENST00000530887 TSPYL6Q8N831 410 aa23.29■■□□□ 1.32
PSMC3-208ENST00000530887 CCDC85AQ96PX6 553 aaPredicted RBP23.29■■□□□ 1.32
PSMC3-208ENST00000530887 TSKSQ9UJT2 592 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms