RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 MTFR1Q15390 333 aa10.44□□□□□ -0.74
SVIP-204ENST00000530199 ECM1Q16610 540 aa10.44□□□□□ -0.74
SVIP-204ENST00000530199 ZNF697Q5TEC3 545 aa10.44□□□□□ -0.74
SVIP-204ENST00000530199 ZNF598Q86UK7 904 aaKnown RBP10.44□□□□□ -0.74
SVIP-204ENST00000530199 XAGE2Q96GT9 111 aa10.44□□□□□ -0.74
SVIP-204ENST00000530199 CASZ1Q86V15 1759 aa10.44□□□□□ -0.74
SVIP-204ENST00000530199 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
SVIP-204ENST00000530199 MTMR3Q13615 1198 aa10.43□□□□□ -0.74
SVIP-204ENST00000530199 NRAPQ86VF7 1730 aa10.43□□□□□ -0.74
SVIP-204ENST00000530199 MYOM1P52179 1685 aa10.43□□□□□ -0.74
SVIP-204ENST00000530199 IQGAP3Q86VI3 1631 aa10.43□□□□□ -0.74
SVIP-204ENST00000530199 A0A1W2PRU2 124 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 PPP1R12BO60237 982 aaPredicted RBP10.42□□□□□ -0.74
SVIP-204ENST00000530199 IL2RAP01589 272 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 ADH1AP07327 375 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 XPCQ01831 940 aaPredicted RBP10.42□□□□□ -0.74
SVIP-204ENST00000530199 MMRN1Q13201 1228 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 HELQQ8TDG4 1101 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 VTI1AQ96AJ9 217 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 FHDC1Q9C0D6 1143 aaPredicted RBP10.42□□□□□ -0.74
SVIP-204ENST00000530199 PKD2L1Q9P0L9 805 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 DLC1Q96QB1 1528 aa10.42□□□□□ -0.74
SVIP-204ENST00000530199 ABCC5O15440 1437 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
SVIP-204ENST00000530199 E9PSI1 815 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 FOXC1Q12948 553 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 TBCELQ5QJ74 424 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 KDF1Q8NAX2 398 aaPredicted RBP10.41□□□□□ -0.74
SVIP-204ENST00000530199 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
SVIP-204ENST00000530199 CROCC2H7BZ55 1655 aa10.41□□□□□ -0.74
SVIP-204ENST00000530199 MAP3K5Q99683 1374 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 CDC42BPGQ6DT37 1551 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 SPATA31A5Q5VU36 1347 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 SPATA31A7Q8IWB4 1347 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 ARHGAP4P98171 946 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
SVIP-204ENST00000530199 ESYT1Q9BSJ8 1104 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 HRH3Q9Y5N1 445 aa10.4□□□□□ -0.74
SVIP-204ENST00000530199 HFM1A2PYH4 1435 aa10.4□□□□□ -0.75
SVIP-204ENST00000530199 CCDC144AA2RUR9 1427 aa10.4□□□□□ -0.75
SVIP-204ENST00000530199 CDK2AP1O14519 115 aa10.39□□□□□ -0.75
SVIP-204ENST00000530199 NPR3P17342 541 aa10.39□□□□□ -0.75
SVIP-204ENST00000530199 CBLBQ13191 982 aa10.39□□□□□ -0.75
SVIP-204ENST00000530199 CLN3Q13286 438 aa10.39□□□□□ -0.75
SVIP-204ENST00000530199 Q6ZVU0 165 aa10.39□□□□□ -0.75
SVIP-204ENST00000530199 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
SVIP-204ENST00000530199 C2orf49Q9BVC5 232 aaPredicted RBP10.39□□□□□ -0.75
SVIP-204ENST00000530199 KLF16Q9BXK1 252 aaPredicted RBP10.39□□□□□ -0.75
SVIP-204ENST00000530199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.751e-8■■■■■ 149.1
SVIP-204ENST00000530199 ANKRD33BA6NCL7 494 aa10.38□□□□□ -0.75
SVIP-204ENST00000530199 PSMA6P60900 246 aaKnown RBP10.38□□□□□ -0.75
SVIP-204ENST00000530199 TLR1Q15399 786 aa10.38□□□□□ -0.75
SVIP-204ENST00000530199 SAP130Q9H0E3 1048 aa10.38□□□□□ -0.75
SVIP-204ENST00000530199 IQSEC3Q9UPP2 1182 aaPredicted RBP10.38□□□□□ -0.75
SVIP-204ENST00000530199 USP3Q9Y6I4 520 aa10.38□□□□□ -0.75
SVIP-204ENST00000530199 FAM13AO94988 1023 aa10.37□□□□□ -0.75
SVIP-204ENST00000530199 COL13A1Q5TAT6 717 aaPredicted RBP10.37□□□□□ -0.75
SVIP-204ENST00000530199 TNS3Q68CZ2 1445 aa10.37□□□□□ -0.75
SVIP-204ENST00000530199 C16orf46Q6P387 395 aa10.37□□□□□ -0.75
SVIP-204ENST00000530199 ABCA3Q99758 1704 aa10.37□□□□□ -0.75
SVIP-204ENST00000530199 RRBP1Q9P2E9 1410 aaKnown RBP10.37□□□□□ -0.75
SVIP-204ENST00000530199 DCTN4Q9UJW0 460 aa10.37□□□□□ -0.75
SVIP-204ENST00000530199 ANKRD30AQ9BXX3 1397 aa10.37□□□□□ -0.75
SVIP-204ENST00000530199 ZIC2O95409 532 aaPredicted RBP10.36□□□□□ -0.75
SVIP-204ENST00000530199 MAPK1P28482 360 aa10.36□□□□□ -0.75
SVIP-204ENST00000530199 PTGIRP43119 386 aa10.36□□□□□ -0.75
SVIP-204ENST00000530199 NPAS4Q8IUM7 802 aa10.36□□□□□ -0.75
SVIP-204ENST00000530199 PRKD2Q9BZL6 878 aa10.36□□□□□ -0.75
SVIP-204ENST00000530199 BTG4Q9NY30 223 aa10.36□□□□□ -0.75
SVIP-204ENST00000530199 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
SVIP-204ENST00000530199 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
SVIP-204ENST00000530199 RGPD4Q7Z3J3 1758 aa10.36□□□□□ -0.75
SVIP-204ENST00000530199 UNCXA6NJT0 531 aa10.35□□□□□ -0.75
SVIP-204ENST00000530199 J3QL48 77 aa10.35□□□□□ -0.75
SVIP-204ENST00000530199 ZBTB7AO95365 584 aa10.35□□□□□ -0.75
SVIP-204ENST00000530199 ZFAND3Q9H8U3 227 aa10.35□□□□□ -0.75
SVIP-204ENST00000530199 KIF1AQ12756 1690 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 DAPK1P53355 1430 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
SVIP-204ENST00000530199 CENPCQ03188 943 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 COX20Q5RI15 118 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 KRT28Q7Z3Y7 464 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 DNAJC5GQ8N7S2 189 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 AGBL1Q96MI9 1066 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 ASB16Q96NS5 453 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 BCL2L13Q9BXK5 485 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 PDGFDQ9GZP0 370 aaPredicted RBP10.34□□□□□ -0.75
SVIP-204ENST00000530199 PLA2G2EQ9NZK7 142 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
SVIP-204ENST00000530199 COL14A1Q05707 1796 aaKnown RBP10.34□□□□□ -0.75
SVIP-204ENST00000530199 TTC24A2A3L6 582 aaPredicted RBP10.33□□□□□ -0.76
SVIP-204ENST00000530199 PLSCR1O15162 318 aa10.33□□□□□ -0.76
SVIP-204ENST00000530199 GDF9O60383 454 aa10.33□□□□□ -0.76
SVIP-204ENST00000530199 TIMP2P16035 220 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms