RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 CASC1Q6TDU7 716 aa10.1□□□□□ -0.79
CMTM1-214ENST00000530141 NPM2Q86SE8 214 aaKnown RBP10.1□□□□□ -0.79
CMTM1-214ENST00000530141 NLGN1Q8N2Q7 840 aa10.1□□□□□ -0.79
CMTM1-214ENST00000530141 METTL22Q9BUU2 404 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-214ENST00000530141 LRRCC1Q9C099 1032 aa10.1□□□□□ -0.79
CMTM1-214ENST00000530141 LRRFIP2Q9Y608 721 aaKnown RBP10.1□□□□□ -0.79
CMTM1-214ENST00000530141 UTYO14607 1347 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 ANKRD31Q8N7Z5 1873 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 MTX1Q13505 466 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 ERC1Q8IUD2 1116 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 PLBD2Q8NHP8 589 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 SSH3Q8TE77 659 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 XAGE3Q8WTP9 111 aa10.09□□□□□ -0.79
CMTM1-214ENST00000530141 AOX1Q06278 1338 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 CNTNAP4Q9C0A0 1308 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 NRXN2Q9P2S2 1712 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 DICER1Q9UPY3 1922 aaKnown RBP10.08□□□□□ -0.8
CMTM1-214ENST00000530141 GLTPD2A6NH11 291 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 NFKBIEO00221 500 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 GRM8O00222 908 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 RPS6KA4O75676 772 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 STARD3NLO95772 234 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 ANXA1P04083 346 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 VEGFAP15692 232 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-214ENST00000530141 LBX1P52954 281 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 AIMP1Q12904 312 aaKnown RBP10.08□□□□□ -0.8
CMTM1-214ENST00000530141 PROSER3Q2NL68 480 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 COPS6Q7L5N1 327 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
CMTM1-214ENST00000530141 USP42Q9H9J4 1324 aaKnown RBP10.07□□□□□ -0.8
CMTM1-214ENST00000530141 COL15A1P39059 1388 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 CNTNAP1P78357 1384 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 PRAMEF22A3QJZ6 481 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
CMTM1-214ENST00000530141 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
CMTM1-214ENST00000530141 CDC45O75419 566 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 MYL6BP14649 208 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 CRKLP46109 303 aaKnown RBP10.07□□□□□ -0.8
CMTM1-214ENST00000530141 BECN1Q14457 450 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 PLEKHM2Q8IWE5 1019 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 KIF1BPQ96EK5 621 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
CMTM1-214ENST00000530141 NOP58Q9Y2X3 529 aaKnown RBP10.07□□□□□ -0.8
CMTM1-214ENST00000530141 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 UBR2Q8IWV8 1755 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 LMNB1P20700 586 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 TTC22Q5TAA0 569 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 PPP1R42Q7Z4L9 355 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 ABHD8Q96I13 439 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 MYD88Q99836 296 aa10.06□□□□□ -0.8
CMTM1-214ENST00000530141 PNMA6EA0A0J9YXQ4 647 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 NEURL1BA8MQ27 555 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 SURF6O75683 361 aaKnown RBP10.05□□□□□ -0.8
CMTM1-214ENST00000530141 VEGFBP49765 207 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 GCKRQ14397 625 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 USPL1Q5W0Q7 1092 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 KIF6Q6ZMV9 814 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
CMTM1-214ENST00000530141 NBPF7P0C2Y1 421 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-214ENST00000530141 HSPA8P11142 646 aaKnown RBP10.04□□□□□ -0.8
CMTM1-214ENST00000530141 OS9Q13438 667 aaPredicted RBP10.04□□□□□ -0.8
CMTM1-214ENST00000530141 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
CMTM1-214ENST00000530141 GPATCH3Q96I76 525 aa10.04□□□□□ -0.8
CMTM1-214ENST00000530141 TBC1D32Q96NH3 1257 aa10.04□□□□□ -0.8
CMTM1-214ENST00000530141 EXOC6BQ9Y2D4 811 aa10.04□□□□□ -0.8
CMTM1-214ENST00000530141 CCDC85CA6NKD9 419 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 APBB1O00213 710 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 DDNO94850 711 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 IGKV5-2P06315 115 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 MX1P20591 662 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 CTCFP49711 727 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 PDE1AP54750 535 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 G3BP1Q13283 466 aaKnown RBP eCLIP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 NFIXQ14938 502 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 CWF19L2Q2TBE0 894 aaKnown RBP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 RC3H1Q5TC82 1133 aaKnown RBP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 HOMEZQ8IX15 550 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 CCDC191Q8NCU4 936 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 C22orf23Q9BZE7 217 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 CWC25Q9NXE8 425 aaPredicted RBP10.03□□□□□ -0.8
CMTM1-214ENST00000530141 STAP2Q9UGK3 403 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
CMTM1-214ENST00000530141 ERC2O15083 957 aa10.02□□□□□ -0.81
CMTM1-214ENST00000530141 HMGB2P26583 209 aaKnown RBP10.02□□□□□ -0.81
CMTM1-214ENST00000530141 TM4SF1P30408 202 aa10.02□□□□□ -0.81
CMTM1-214ENST00000530141 MFAP1P55081 439 aaKnown RBP10.02□□□□□ -0.81
CMTM1-214ENST00000530141 INTS5Q6P9B9 1019 aaKnown RBP10.02□□□□□ -0.81
CMTM1-214ENST00000530141 C2CD5Q86YS7 1000 aa10.02□□□□□ -0.81
CMTM1-214ENST00000530141 CLASRPQ8N2M8 674 aaKnown RBP10.02□□□□□ -0.81
CMTM1-214ENST00000530141 SUCLG2Q96I99 432 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms