RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 PPP1R42Q7Z4L9 355 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 POLR2AP24928 1970 aaKnown RBP11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 ERBB4Q15303 1308 aa11.24□□□□□ -0.61
TGFBR3-208ENST00000529608 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 RAD17O75943 681 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 PLCG2P16885 1265 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 ECE1P42892 770 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 PARP10Q53GL7 1025 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 SP8Q8IXZ3 490 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 NECTIN2Q92692 538 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
TGFBR3-208ENST00000529608 SLC34A2O95436 690 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 EGFRP00533 1210 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 KIAA2012Q0VF49 1180 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 COPS6Q7L5N1 327 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 MPNDQ8N594 471 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
TGFBR3-208ENST00000529608 SCN9AQ15858 1988 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 MAP2K2P36507 400 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 RGS19P49795 217 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 DPP8Q6V1X1 898 aaPredicted RBP11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 XAGE3Q8WTP9 111 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
TGFBR3-208ENST00000529608 BBOX1O75936 387 aa11.2□□□□□ -0.62
TGFBR3-208ENST00000529608 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
TGFBR3-208ENST00000529608 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
TGFBR3-208ENST00000529608 TNRC18O15417 2968 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 CCER2I3L3R5 266 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 STK25O00506 426 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 NEFMP07197 916 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 RIPK4P57078 832 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 TCIRG1Q13488 830 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 GRAPQ13588 217 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 SAMD7Q7Z3H4 446 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 SUPT20HQ8NEM7 779 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 GRAPLQ8TC17 118 aaPredicted RBP11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 BCL2L13Q9BXK5 485 aa11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
TGFBR3-208ENST00000529608 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 FAM155AB1AL88 458 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 PSMD14O00487 310 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 ANP32CO43423 234 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 DDX46Q7L014 1031 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 CDC37L1Q7L3B6 337 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 ZC3H15Q8WU90 426 aaKnown RBP11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 DBNDD1Q9H9R9 158 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
TGFBR3-208ENST00000529608 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 SH3TC1Q8TE82 1336 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 PSME4Q14997 1843 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 GPSM2P81274 684 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 TNIP1Q15025 636 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 TBC1D10BQ4KMP7 808 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 CHPF2Q9P2E5 772 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 POLLQ9UGP5 575 aa11.17□□□□□ -0.62
TGFBR3-208ENST00000529608 ZNF646O15015 1829 aaPredicted RBP11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 ATP5J2-PTCD1G3V325 749 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 HUNKP57058 714 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 DGKZQ13574 1117 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 ISCA1Q9BUE6 129 aa11.16□□□□□ -0.62
TGFBR3-208ENST00000529608 CHL1O00533 1208 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.62
TGFBR3-208ENST00000529608 DPF2Q92785 391 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms