RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MMP20O60882 483 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
CSDE1-212ENST00000529046 PLAURQ03405 335 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 PERM1Q5SV97 790 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 ELMSAN1Q6PJG2 1045 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 AEBP1Q8IUX7 1158 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 LPIN3Q9BQK8 851 aa8.55□□□□□ -1.04
CSDE1-212ENST00000529046 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
CSDE1-212ENST00000529046 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
CSDE1-212ENST00000529046 FNDC3AQ9Y2H6 1198 aaKnown RBP8.54□□□□□ -1.04
CSDE1-212ENST00000529046 APBA3O96018 575 aa8.53□□□□□ -1.04
CSDE1-212ENST00000529046 SOX18P35713 384 aa8.53□□□□□ -1.04
CSDE1-212ENST00000529046 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
CSDE1-212ENST00000529046 NSUN5Q96P11 429 aaKnown RBP8.53□□□□□ -1.04
CSDE1-212ENST00000529046 HOXD8P13378 290 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-212ENST00000529046 TRIM26Q12899 539 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-212ENST00000529046 SMG9Q9H0W8 520 aaKnown RBP8.52□□□□□ -1.05
CSDE1-212ENST00000529046 A0A0A0MRY4 1105 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 LOC102724428A0A0B4J2F2 783 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 GHRHP01286 108 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 BAG6P46379 1132 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 SIK1P57059 783 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 RAC1P63000 192 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 ARHGAP4P98171 946 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 ATCAYQ86WG3 371 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 TTC9Q92623 222 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 NACC1Q96RE7 527 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
CSDE1-212ENST00000529046 J3QW42 95 aa8.5□□□□□ -1.05
CSDE1-212ENST00000529046 ZNF211Q13398 564 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-212ENST00000529046 GRIK5Q16478 980 aa8.5□□□□□ -1.05
CSDE1-212ENST00000529046 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
CSDE1-212ENST00000529046 MSL1Q68DK7 614 aa8.5□□□□□ -1.05
CSDE1-212ENST00000529046 DMRTC2Q8IXT2 367 aaPredicted RBP8.5□□□□□ -1.05
CSDE1-212ENST00000529046 NUDT16Q96DE0 195 aaKnown RBP8.5□□□□□ -1.05
CSDE1-212ENST00000529046 FAM13AO94988 1023 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 ELNP15502 786 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 MPSTP25325 297 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 MTMR3Q13615 1198 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 GRIK4Q16099 956 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 TTC39BQ5VTQ0 682 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-212ENST00000529046 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
CSDE1-212ENST00000529046 WFDC8Q8IUA0 241 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 OR13H1Q8NG92 308 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 EDEM1Q92611 657 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 PLD4Q96BZ4 506 aa8.49□□□□□ -1.05
CSDE1-212ENST00000529046 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
CSDE1-212ENST00000529046 RPLP1P05386 114 aaKnown RBP8.48□□□□□ -1.05
CSDE1-212ENST00000529046 PCSK2P16519 638 aa8.48□□□□□ -1.05
CSDE1-212ENST00000529046 GATA4P43694 442 aa8.48□□□□□ -1.05
CSDE1-212ENST00000529046 ABI2Q9NYB9 513 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-212ENST00000529046 H3BRB1 525 aa8.47□□□□□ -1.05
CSDE1-212ENST00000529046 ABL1P00519 1130 aa8.47□□□□□ -1.05
CSDE1-212ENST00000529046 EIF1AXP47813 144 aaKnown RBP8.47□□□□□ -1.05
CSDE1-212ENST00000529046 DNM1Q05193 864 aaKnown RBP8.47□□□□□ -1.05
CSDE1-212ENST00000529046 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
CSDE1-212ENST00000529046 ILDR2Q71H61 639 aa8.47□□□□□ -1.05
CSDE1-212ENST00000529046 ZNF438Q7Z4V0 828 aa8.47□□□□□ -1.05
CSDE1-212ENST00000529046 FMR1NBQ8N0W7 255 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-212ENST00000529046 TUT1Q9H6E5 874 aaKnown RBP8.47□□□□□ -1.05
CSDE1-212ENST00000529046 HYAL2Q12891 473 aa8.46□□□□□ -1.06
CSDE1-212ENST00000529046 ALKBH2Q6NS38 261 aa8.46□□□□□ -1.06
CSDE1-212ENST00000529046 DTWD1Q8N5C7 304 aa8.46□□□□□ -1.06
CSDE1-212ENST00000529046 TTC16Q8NEE8 873 aa8.46□□□□□ -1.06
CSDE1-212ENST00000529046 ELP3Q9H9T3 547 aa8.46□□□□□ -1.06
CSDE1-212ENST00000529046 C9orf172C9J069 976 aa8.45□□□□□ -1.06
CSDE1-212ENST00000529046 PDGFAP04085 211 aa8.45□□□□□ -1.06
CSDE1-212ENST00000529046 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-212ENST00000529046 GDF6Q6KF10 455 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-212ENST00000529046 GLYCTKQ8IVS8 523 aa8.45□□□□□ -1.06
CSDE1-212ENST00000529046 SPACA7Q96KW9 195 aa8.45□□□□□ -1.06
CSDE1-212ENST00000529046 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
CSDE1-212ENST00000529046 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
CSDE1-212ENST00000529046 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-212ENST00000529046 FZD6O60353 706 aa8.44□□□□□ -1.06
CSDE1-212ENST00000529046 FURINP09958 794 aa8.44□□□□□ -1.06
CSDE1-212ENST00000529046 SELPP16109 830 aa8.44□□□□□ -1.06
CSDE1-212ENST00000529046 AAMPQ13685 434 aa8.44□□□□□ -1.06
CSDE1-212ENST00000529046 COL13A1Q5TAT6 717 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-212ENST00000529046 GZF1Q9H116 711 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-212ENST00000529046 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-212ENST00000529046 ADAM23O75077 832 aa8.43□□□□□ -1.06
CSDE1-212ENST00000529046 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-212ENST00000529046 DOC2BQ14184 412 aa8.43□□□□□ -1.06
CSDE1-212ENST00000529046 C8orf34Q49A92 452 aa8.43□□□□□ -1.06
CSDE1-212ENST00000529046 SHISA2Q6UWI4 295 aa8.43□□□□□ -1.06
CSDE1-212ENST00000529046 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-212ENST00000529046 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
CSDE1-212ENST00000529046 KIF4AO95239 1232 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 IGHA2P01877 340 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-212ENST00000529046 XKR5Q6UX68 686 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 NCAPG2Q86XI2 1143 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 FBXO11Q86XK2 927 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 GGNBP2Q9H3C7 697 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 TRIM33Q9UPN9 1127 aa8.42□□□□□ -1.06
CSDE1-212ENST00000529046 A6NHS1 94 aa8.41□□□□□ -1.06
CSDE1-212ENST00000529046 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
CSDE1-212ENST00000529046 ATP11AP98196 1134 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms