RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
AP003063.1-201ENST00000528496 GNPATO15228 680 aa11.18□□□□□ -0.62
AP003063.1-201ENST00000528496 MSL1Q68DK7 614 aa11.18□□□□□ -0.62
AP003063.1-201ENST00000528496 CAVIN1Q6NZI2 390 aaKnown RBP11.18□□□□□ -0.62
AP003063.1-201ENST00000528496 ZDHHC9Q9Y397 364 aa11.18□□□□□ -0.62
AP003063.1-201ENST00000528496 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 RAD50Q92878 1312 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 PTCD1O75127 700 aaKnown RBP11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 HSPA4P34932 840 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 RILPL2Q969X0 211 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 SYAP1Q96A49 352 aaPredicted RBP11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 ANO2Q9NQ90 1003 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 SCN11AQ9UI33 1791 aa11.17□□□□□ -0.62
AP003063.1-201ENST00000528496 RNMTO43148 476 aaKnown RBP11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 ALDH1L1O75891 902 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 MTX1Q13505 466 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 PPP1R15BQ5SWA1 713 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 LRSAM1Q6UWE0 723 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 TMEM92Q6UXU6 159 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 RHPN1Q8TCX5 695 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 DNAAF4Q8WXU2 420 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
AP003063.1-201ENST00000528496 ERBB4Q15303 1308 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 PRPF40AO75400 957 aaKnown RBP11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 NCLP19338 710 aaKnown RBP11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 YY1P25490 414 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 PKP1Q13835 747 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 DSG2Q14126 1118 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 AMIGO3Q86WK7 504 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 GPT2Q8TD30 523 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 PDLIM2Q96JY6 352 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 LGR6Q9HBX8 967 aa11.15□□□□□ -0.62
AP003063.1-201ENST00000528496 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 SGSM2O43147 1006 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 SURF6O75683 361 aaKnown RBP11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 TPM2P07951 284 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 GPR162Q16538 588 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 SMIM5Q71RC9 77 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 ERC1Q8IUD2 1116 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 TMEM87AQ8NBN3 555 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 RUFY2Q8WXA3 655 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 NAP1L5Q96NT1 182 aaPredicted RBP11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
AP003063.1-201ENST00000528496 MRC1P22897 1456 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 MSNP26038 577 aaKnown RBP11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 MCM5P33992 734 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 RFC4P35249 363 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 TERF1P54274 439 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 PLPP6Q8IY26 295 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 NECTIN2Q92692 538 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 GPATCH3Q96I76 525 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 CD2APQ9Y5K6 639 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 ADCY9O60503 1353 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 TCHHQ07283 1943 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 HEG1Q9ULI3 1381 aa11.13□□□□□ -0.63
AP003063.1-201ENST00000528496 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 FOXK1P85037 733 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 TEFQ10587 303 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 MFSD10Q14728 455 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 E2F4Q16254 413 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 TSHZ3Q63HK5 1081 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 NLGN2Q8NFZ4 835 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 LSG1Q9H089 658 aaKnown RBP11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 RBSNQ9H1K0 784 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 TMEM63CQ9P1W3 806 aa11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
AP003063.1-201ENST00000528496 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 HIP1O00291 1037 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 KIF3CO14782 793 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 SLC39A6Q13433 755 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 KCNB2Q92953 911 aa11.11□□□□□ -0.63
AP003063.1-201ENST00000528496 TTC14Q96N46 770 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms