RNA–Protein interactions for RNA: ENST00000528427.1

GTF2H1-209, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-209ENST00000528427 C9orf172C9J069 976 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 TNFRSF10BO14763 440 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 XYLBO75191 536 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 NRLP54845 237 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 RAC1P63000 192 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 TMEM164Q5U3C3 297 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 MSL1Q68DK7 614 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 TTC9Q92623 222 aa9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 TLR7Q9NYK1 1049 aaKnown RBP9.05□□□□□ -0.96
GTF2H1-209ENST00000528427 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
GTF2H1-209ENST00000528427 CMTR1Q8N1G2 835 aaKnown RBP9.04□□□□□ -0.96
GTF2H1-209ENST00000528427 Q8N3U1 123 aa9.04□□□□□ -0.96
GTF2H1-209ENST00000528427 SLAIN2Q9P270 581 aa9.04□□□□□ -0.96
GTF2H1-209ENST00000528427 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
GTF2H1-209ENST00000528427 ARID3AQ99856 593 aa9.03□□□□□ -0.96
GTF2H1-209ENST00000528427 DYRK3O43781 588 aa9.02□□□□□ -0.97
GTF2H1-209ENST00000528427 HOXD8P13378 290 aaPredicted RBP9.02□□□□□ -0.97
GTF2H1-209ENST00000528427 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.97
GTF2H1-209ENST00000528427 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
GTF2H1-209ENST00000528427 MKNK1Q9BUB5 465 aa9.02□□□□□ -0.97
GTF2H1-209ENST00000528427 WDR62O43379 1518 aa9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 MMP20O60882 483 aa9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 BRD2P25440 801 aaKnown RBP9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 FBXO11Q86XK2 927 aa9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 DTWD1Q8N5C7 304 aa9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 CLP1Q92989 425 aaKnown RBP9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 SMG9Q9H0W8 520 aaKnown RBP9.01□□□□□ -0.97
GTF2H1-209ENST00000528427 CUX1P39880 1505 aa9□□□□□ -0.97
GTF2H1-209ENST00000528427 TOPBP1Q92547 1522 aa9□□□□□ -0.97
GTF2H1-209ENST00000528427 SYNJ1O43426 1573 aa9□□□□□ -0.97
GTF2H1-209ENST00000528427 FOXD4L6Q3SYB3 417 aaPredicted RBP9□□□□□ -0.97
GTF2H1-209ENST00000528427 FOXD4L3Q6VB84 417 aaPredicted RBP9□□□□□ -0.97
GTF2H1-209ENST00000528427 THOC2Q8NI27 1593 aaKnown RBP8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 J3QW42 95 aa8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 EIF2AK2P19525 551 aaKnown RBP8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 ARID4AP29374 1257 aaPredicted RBP8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 NRG1Q02297 640 aaPredicted RBP8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 NAA30Q147X3 362 aaPredicted RBP8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
GTF2H1-209ENST00000528427 LOC102724428A0A0B4J2F2 783 aa8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 PTCD1O75127 700 aaKnown RBP8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 DEAF1O75398 565 aaPredicted RBP8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 PSAPP07602 524 aa8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 SOX18P35713 384 aa8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 SIK1P57059 783 aa8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 WFDC8Q8IUA0 241 aa8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 USTQ9Y2C2 406 aa8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 URB2Q14146 1524 aaKnown RBP8.98□□□□□ -0.97
GTF2H1-209ENST00000528427 NLRP13Q86W25 1043 aa8.97□□□□□ -0.97
GTF2H1-209ENST00000528427 PLD4Q96BZ4 506 aa8.97□□□□□ -0.97
GTF2H1-209ENST00000528427 NSUN5Q96P11 429 aaKnown RBP8.97□□□□□ -0.97
GTF2H1-209ENST00000528427 WDR97A6NE52 1622 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 ZBTB39O15060 712 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 H2AFB1P0C5Y9 115 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 H2AFB2P0C5Z0 115 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 USP21Q9UK80 565 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 EEA1Q15075 1411 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 FGD5Q6ZNL6 1462 aa8.96□□□□□ -0.98
GTF2H1-209ENST00000528427 ZAP70P43403 619 aa8.95□□□□□ -0.98
GTF2H1-209ENST00000528427 ZMYM1Q5SVZ6 1142 aa8.95□□□□□ -0.98
GTF2H1-209ENST00000528427 DLL1O00548 723 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 PRSS36Q5K4E3 855 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 OR13H1Q8NG92 308 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 PIK3R5Q8WYR1 880 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 STIM2Q9P246 746 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 CUX2O14529 1486 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 POLA1P09884 1462 aaPredicted RBP8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 IFT140Q96RY7 1462 aa8.94□□□□□ -0.98
GTF2H1-209ENST00000528427 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 UBAP1LF5GYI3 381 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 NOS3P29474 1203 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 PDE4CQ08493 712 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 COL13A1Q5TAT6 717 aaPredicted RBP8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 IGF2-ASQ6U949 168 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 WFDC12Q8WWY7 111 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 SEPT3Q9UH03 358 aa8.93□□□□□ -0.98
GTF2H1-209ENST00000528427 SOGA1O94964 1423 aa8.92□□□□□ -0.98
GTF2H1-209ENST00000528427 GHRHP01286 108 aa8.92□□□□□ -0.98
GTF2H1-209ENST00000528427 ATP2B4P23634 1241 aa8.92□□□□□ -0.98
GTF2H1-209ENST00000528427 TP53INP1Q96A56 240 aa8.92□□□□□ -0.98
GTF2H1-209ENST00000528427 FAM13BQ9NYF5 915 aa8.92□□□□□ -0.98
GTF2H1-209ENST00000528427 TRIM33Q9UPN9 1127 aa8.92□□□□□ -0.98
GTF2H1-209ENST00000528427 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
GTF2H1-209ENST00000528427 KIF27Q86VH2 1401 aa8.91□□□□□ -0.98
GTF2H1-209ENST00000528427 IREB2P48200 963 aaKnown RBP8.91□□□□□ -0.98
GTF2H1-209ENST00000528427 GDF6Q6KF10 455 aaPredicted RBP8.91□□□□□ -0.98
GTF2H1-209ENST00000528427 GPR152Q8TDT2 470 aa8.91□□□□□ -0.98
GTF2H1-209ENST00000528427 IL22RA1Q8N6P7 574 aa8.9□□□□□ -0.98
GTF2H1-209ENST00000528427 ABTB2Q8N961 1025 aa8.9□□□□□ -0.98
GTF2H1-209ENST00000528427 SETDB1Q15047 1291 aa8.89□□□□□ -0.99
GTF2H1-209ENST00000528427 RETREG2Q8NC44 543 aa8.89□□□□□ -0.99
GTF2H1-209ENST00000528427 MEGF10Q96KG7 1140 aa8.89□□□□□ -0.99
GTF2H1-209ENST00000528427 RBSNQ9H1K0 784 aa8.89□□□□□ -0.99
GTF2H1-209ENST00000528427 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
GTF2H1-209ENST00000528427 ATP11AP98196 1134 aa8.88□□□□□ -0.99
GTF2H1-209ENST00000528427 ADAMTSL4Q6UY14 1074 aa8.88□□□□□ -0.99
GTF2H1-209ENST00000528427 FNDC3AQ9Y2H6 1198 aaKnown RBP8.88□□□□□ -0.99
GTF2H1-209ENST00000528427 KIF4AO95239 1232 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms