RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 CEP135Q66GS9 1140 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 NEK1Q96PY6 1258 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 DBNDD2Q9BQY9 259 aa11.6□□□□□ -0.55
SF3B2-206ENST00000528302 ZNF215Q9UL58 517 aaPredicted RBP11.6□□□□□ -0.55
SF3B2-206ENST00000528302 KSR2Q6VAB6 950 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 SNRKQ9NRH2 765 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 GCP02774 474 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 COPS6Q7L5N1 327 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 XAGE3Q8WTP9 111 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 CLSTN2Q9H4D0 955 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 GOLIM4O00461 696 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 SCRN1Q12765 414 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 ELF2Q15723 593 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 GOLPH3LQ9H4A5 285 aa11.59□□□□□ -0.55
SF3B2-206ENST00000528302 NPHP3Q7Z494 1330 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 CLSTN1O94985 981 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 TIMM10P62072 90 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 SF3A1Q15459 793 aaKnown RBP11.58□□□□□ -0.56
SF3B2-206ENST00000528302 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 USP28Q96RU2 1077 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 GIGYF1O75420 1035 aaPredicted RBP11.58□□□□□ -0.56
SF3B2-206ENST00000528302 CYP21A2P08686 494 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
SF3B2-206ENST00000528302 TTLL5Q6EMB2 1281 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 CCDC73Q6ZRK6 1079 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 CERS3Q8IU89 383 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
SF3B2-206ENST00000528302 KDRP35968 1356 aa11.58□□□□□ -0.56
SF3B2-206ENST00000528302 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
SF3B2-206ENST00000528302 KINO60870 393 aaKnown RBP11.57□□□□□ -0.56
SF3B2-206ENST00000528302 TAF5LO75529 589 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
SF3B2-206ENST00000528302 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.56
SF3B2-206ENST00000528302 PTPN14Q15678 1187 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 PSMD1Q99460 953 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 DDX19AQ9NUU7 478 aaKnown RBP11.57□□□□□ -0.56
SF3B2-206ENST00000528302 IGKV5-2P06315 115 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 CNPY4Q8N129 248 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 IP6K1Q92551 441 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 TM6SF1Q9BZW5 370 aa11.57□□□□□ -0.56
SF3B2-206ENST00000528302 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 PIK3C2AO00443 1686 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
SF3B2-206ENST00000528302 RXRAP19793 462 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 HSPA2P54652 639 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
SF3B2-206ENST00000528302 STOX1Q6ZVD7 989 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 LRRC8AQ8IWT6 810 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 NFATC2IPQ8NCF5 419 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 LRRN4CLQ8ND94 238 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 GTF3C6Q969F1 213 aa11.56□□□□□ -0.56
SF3B2-206ENST00000528302 TPM3P06753 285 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
SF3B2-206ENST00000528302 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 KRT28Q7Z3Y7 464 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-206ENST00000528302 RESTQ13127 1097 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 TMC6Q7Z403 805 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 PLA2G4DQ86XP0 818 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 COL15A1P39059 1388 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 NRKQ7Z2Y5 1582 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
SF3B2-206ENST00000528302 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-206ENST00000528302 MARCKSP29966 332 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-206ENST00000528302 FER1L4A9Z1Z3 1794 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 DDX58O95786 925 aaKnown RBP11.54□□□□□ -0.56
SF3B2-206ENST00000528302 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 LINS1Q8NG48 757 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 A0A087WZG4 1122 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 TDRD7Q8NHU6 1098 aaKnown RBP11.54□□□□□ -0.56
SF3B2-206ENST00000528302 EPC1Q9H2F5 836 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 IFNKQ9P0W0 207 aa11.54□□□□□ -0.56
SF3B2-206ENST00000528302 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 KMT5BQ4FZB7 885 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 CTNNA3Q9UI47 895 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 CFAP45Q9UL16 551 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 HIP1O00291 1037 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 STK38Q15208 465 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 DPCR1Q3MIW9 517 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 TNNI3KQ59H18 835 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 AKAP4Q5JQC9 854 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 FPGT-TNNI3KV9GXZ4 949 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 RGPD2P0DJD1 1756 aa11.53□□□□□ -0.56
SF3B2-206ENST00000528302 A0A0G2JS52 829 aa11.52□□□□□ -0.56
SF3B2-206ENST00000528302 CTIFO43310 598 aaKnown RBP11.52□□□□□ -0.56
SF3B2-206ENST00000528302 FBXO38Q6PIJ6 1188 aa11.52□□□□□ -0.56
SF3B2-206ENST00000528302 IQCB1Q15051 598 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 STX1AQ16623 288 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 CCAR2Q8N163 923 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms