RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TTLL11Q8NHH1 800 aa18.13■□□□□ 0.49
CAPN1-212ENST00000527887 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
CAPN1-212ENST00000527887 DBNDD1Q9H9R9 158 aa18.13■□□□□ 0.49
CAPN1-212ENST00000527887 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-212ENST00000527887 XDHP47989 1333 aa18.13■□□□□ 0.49
CAPN1-212ENST00000527887 G3V3G9 751 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 ECE2O60344 883 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 UFL1O94874 794 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 ATP2B4P23634 1241 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 GCKRQ14397 625 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 CWF19L2Q2TBE0 894 aaKnown RBP18.12■□□□□ 0.49
CAPN1-212ENST00000527887 DCAF8Q5TAQ9 597 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-212ENST00000527887 PLA2G12BQ9BX93 195 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 BSDC1Q9NW68 430 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-212ENST00000527887 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
CAPN1-212ENST00000527887 PSMD14O00487 310 aa18.11■□□□□ 0.49
CAPN1-212ENST00000527887 VEGFBP49765 207 aa18.11■□□□□ 0.49
CAPN1-212ENST00000527887 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
CAPN1-212ENST00000527887 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
CAPN1-212ENST00000527887 ABT1Q9ULW3 272 aaKnown RBP18.11■□□□□ 0.49
CAPN1-212ENST00000527887 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
CAPN1-212ENST00000527887 CDC37L1Q7L3B6 337 aa18.1■□□□□ 0.49
CAPN1-212ENST00000527887 MICALL2Q8IY33 904 aa18.1■□□□□ 0.49
CAPN1-212ENST00000527887 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-212ENST00000527887 HIRAP54198 1017 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-212ENST00000527887 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
CAPN1-212ENST00000527887 UBE3BQ7Z3V4 1068 aa18.09■□□□□ 0.49
CAPN1-212ENST00000527887 PODNQ7Z5L7 613 aa18.09■□□□□ 0.49
CAPN1-212ENST00000527887 GREM2Q9H772 168 aa18.09■□□□□ 0.49
CAPN1-212ENST00000527887 ZBTB12Q9Y330 459 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-212ENST00000527887 CSF1RP07333 972 aa18.08■□□□□ 0.48
CAPN1-212ENST00000527887 IGHMBP2P38935 993 aaKnown RBP18.08■□□□□ 0.48
CAPN1-212ENST00000527887 ECE1P42892 770 aa18.08■□□□□ 0.48
CAPN1-212ENST00000527887 COL13A1Q5TAT6 717 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-212ENST00000527887 CST9Q5W186 159 aa18.08■□□□□ 0.48
CAPN1-212ENST00000527887 MINPP1Q9UNW1 487 aa18.08■□□□□ 0.48
CAPN1-212ENST00000527887 TAF1P21675 1872 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 WDR33Q9C0J8 1336 aaKnown RBP18.07■□□□□ 0.48
CAPN1-212ENST00000527887 AGBL3Q8NEM8 1001 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 TRPM4Q8TD43 1214 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 HHIPL1Q96JK4 782 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 LEMD3Q9Y2U8 911 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 TLL2Q9Y6L7 1015 aa18.07■□□□□ 0.48
CAPN1-212ENST00000527887 TRAF5O00463 557 aa18.06■□□□□ 0.48
CAPN1-212ENST00000527887 CASP7P55210 303 aa18.06■□□□□ 0.48
CAPN1-212ENST00000527887 MAP2K1Q02750 393 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-212ENST00000527887 GPR101Q96P66 508 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-212ENST00000527887 ANKRD2Q9GZV1 360 aa18.06■□□□□ 0.48
CAPN1-212ENST00000527887 SPINK5Q9NQ38 1064 aaPredicted RBP18.06■□□□□ 0.48
CAPN1-212ENST00000527887 ZNF609O15014 1411 aa18.06■□□□□ 0.48
CAPN1-212ENST00000527887 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
CAPN1-212ENST00000527887 KCNQ5Q9NR82 932 aa18.05■□□□□ 0.48
CAPN1-212ENST00000527887 WBP1LQ9NX94 342 aa18.05■□□□□ 0.48
CAPN1-212ENST00000527887 COL4A1P02462 1669 aa18.05■□□□□ 0.48
CAPN1-212ENST00000527887 CELF2O95319 508 aaKnown RBP18.04■□□□□ 0.48
CAPN1-212ENST00000527887 ITGA6P23229 1130 aa18.04■□□□□ 0.48
CAPN1-212ENST00000527887 MMP14P50281 582 aa18.04■□□□□ 0.48
CAPN1-212ENST00000527887 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
CAPN1-212ENST00000527887 BEND3Q5T5X7 828 aa18.04■□□□□ 0.48
CAPN1-212ENST00000527887 RSBN1LQ6PCB5 846 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-212ENST00000527887 SAMD7Q7Z3H4 446 aa18.04■□□□□ 0.48
CAPN1-212ENST00000527887 GLIS2Q9BZE0 524 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-212ENST00000527887 PRDM10Q9NQV6 1147 aa18.04■□□□□ 0.48
CAPN1-212ENST00000527887 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
CAPN1-212ENST00000527887 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
CAPN1-212ENST00000527887 USP17L3A6NCW0 530 aa18.03■□□□□ 0.48
CAPN1-212ENST00000527887 USP17L4A6NCW7 530 aa18.03■□□□□ 0.48
CAPN1-212ENST00000527887 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-212ENST00000527887 ZNF280AP59817 542 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-212ENST00000527887 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.48
CAPN1-212ENST00000527887 TBC1D10BQ4KMP7 808 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-212ENST00000527887 USP17L1Q7RTZ2 530 aa18.03■□□□□ 0.48
CAPN1-212ENST00000527887 SAPCD2Q86UD0 394 aa18.03■□□□□ 0.48
CAPN1-212ENST00000527887 DCPSQ96C86 337 aaKnown RBP18.03■□□□□ 0.48
CAPN1-212ENST00000527887 CAPNS2Q96L46 248 aa18.03■□□□□ 0.48
CAPN1-212ENST00000527887 SHTN1A0MZ66 631 aa18.02■□□□□ 0.48
CAPN1-212ENST00000527887 ANKRD18BA2A2Z9 1011 aa18.02■□□□□ 0.48
CAPN1-212ENST00000527887 MAP2K2P36507 400 aa18.02■□□□□ 0.48
CAPN1-212ENST00000527887 TNS4Q8IZW8 715 aa18.02■□□□□ 0.48
CAPN1-212ENST00000527887 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
CAPN1-212ENST00000527887 CACNA1FO60840 1977 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 FOXN1O15353 648 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 ALDH1L1O75891 902 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 KIF4BQ2VIQ3 1234 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 KRT26Q7Z3Y9 468 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 USP48Q86UV5 1035 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 GMLQ99445 158 aa18.01■□□□□ 0.47
CAPN1-212ENST00000527887 E9PSI1 815 aa18■□□□□ 0.47
CAPN1-212ENST00000527887 F6X3S4 739 aa18■□□□□ 0.47
CAPN1-212ENST00000527887 USP17L8P0C7I0 530 aa18■□□□□ 0.47
CAPN1-212ENST00000527887 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
CAPN1-212ENST00000527887 RBM26Q5T8P6 1007 aaKnown RBP18■□□□□ 0.47
CAPN1-212ENST00000527887 PAXIP1Q6ZW49 1069 aaPredicted RBP18■□□□□ 0.47
CAPN1-212ENST00000527887 ZNF804BA4D1E1 1349 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 GRM8O00222 908 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 EGFRP00533 1210 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms