RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
LINC01001-201ENST00000526704 PYCARDQ9ULZ3 195 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 PALLDQ8WX93 1383 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 PLEKHG2Q9H7P9 1386 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 A0A087WZG4 1122 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 STOX1Q6ZVD7 989 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 LUZP1Q86V48 1076 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 KIAA1524Q8TCG1 905 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 DCAF5Q96JK2 942 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 PAPPAQ13219 1627 aa13.79□□□□□ -0.2
LINC01001-201ENST00000526704 ANO6Q4KMQ2 910 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
LINC01001-201ENST00000526704 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 TPM3P06753 285 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
LINC01001-201ENST00000526704 PROSER2Q86WR7 435 aaPredicted RBP13.78□□□□□ -0.2
LINC01001-201ENST00000526704 CBX8Q9HC52 389 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 NR1I2O75469 434 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 HMGN5P82970 282 aaKnown RBP13.78□□□□□ -0.2
LINC01001-201ENST00000526704 SCRN1Q12765 414 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 LRRC2Q9BYS8 371 aa13.78□□□□□ -0.2
LINC01001-201ENST00000526704 MYH7P12883 1935 aa13.77□□□□□ -0.2
LINC01001-201ENST00000526704 GTF2F1P35269 517 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC01001-201ENST00000526704 FOXO4P98177 505 aa13.77□□□□□ -0.21
LINC01001-201ENST00000526704 PLBD2Q8NHP8 589 aa13.77□□□□□ -0.21
LINC01001-201ENST00000526704 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
LINC01001-201ENST00000526704 DDX17Q92841 729 aaKnown RBP13.77□□□□□ -0.21
LINC01001-201ENST00000526704 DDX11Q96FC9 970 aa13.77□□□□□ -0.21
LINC01001-201ENST00000526704 GOLGA6L6A8MZA4 724 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 PFKFB2O60825 505 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 SLFNL1Q499Z3 407 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
LINC01001-201ENST00000526704 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 H3BQV1 296 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 IFFO2Q5TF58 517 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 NSUN7Q8NE18 718 aaKnown RBP13.76□□□□□ -0.21
LINC01001-201ENST00000526704 TDRD7Q8NHU6 1098 aaKnown RBP13.76□□□□□ -0.21
LINC01001-201ENST00000526704 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
LINC01001-201ENST00000526704 CCDC9Q9Y3X0 531 aaKnown RBP13.76□□□□□ -0.21
LINC01001-201ENST00000526704 PTGS1P23219 599 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 ZSCAN16Q9H4T2 348 aaPredicted RBP13.75□□□□□ -0.21
LINC01001-201ENST00000526704 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 H7C1W4 665 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 GOLIM4O00461 696 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 CTDNEP1O95476 244 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
LINC01001-201ENST00000526704 PLA2G4DQ86XP0 818 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 TSC1Q92574 1164 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 LLPHQ9BRT6 129 aaKnown RBP13.75□□□□□ -0.21
LINC01001-201ENST00000526704 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
LINC01001-201ENST00000526704 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 ADD1P35611 737 aaKnown RBP13.74□□□□□ -0.21
LINC01001-201ENST00000526704 CABP4P57796 275 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 A0A0G2JLW4 131 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
LINC01001-201ENST00000526704 ZNF75DP51815 510 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
LINC01001-201ENST00000526704 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 AGXT2Q9BYV1 514 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 DNAJC25Q9H1X3 360 aa13.74□□□□□ -0.21
LINC01001-201ENST00000526704 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
LINC01001-201ENST00000526704 APOBRQ0VD83 1088 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 ZMYM1Q5SVZ6 1142 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 NAA16Q6N069 864 aaPredicted RBP13.73□□□□□ -0.21
LINC01001-201ENST00000526704 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 SALL1Q9NSC2 1324 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 FGD1P98174 961 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 NEUROD6Q96NK8 337 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 CFAP45Q9UL16 551 aa13.73□□□□□ -0.21
LINC01001-201ENST00000526704 FOSBP53539 338 aa13.72□□□□□ -0.21
LINC01001-201ENST00000526704 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
LINC01001-201ENST00000526704 MAST3O60307 1309 aa13.72□□□□□ -0.21
LINC01001-201ENST00000526704 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
LINC01001-201ENST00000526704 ZNF165P49910 485 aa13.72□□□□□ -0.21
LINC01001-201ENST00000526704 TIMM10P62072 90 aa13.72□□□□□ -0.21
LINC01001-201ENST00000526704 CEBPZQ03701 1054 aaKnown RBP13.72□□□□□ -0.21
LINC01001-201ENST00000526704 CCDC186Q7Z3E2 898 aa13.72□□□□□ -0.21
LINC01001-201ENST00000526704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.72□□□□□ -0.21
LINC01001-201ENST00000526704 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
LINC01001-201ENST00000526704 E7EWF7 191 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms