RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 KDM3BQ7LBC6 1761 aa18.07■□□□□ 0.48
SSRP1-203ENST00000526696 ZNF280AP59817 542 aaPredicted RBP18.07■□□□□ 0.48
SSRP1-203ENST00000526696 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
SSRP1-203ENST00000526696 DDX46Q7L014 1031 aaKnown RBP18.07■□□□□ 0.48
SSRP1-203ENST00000526696 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
SSRP1-203ENST00000526696 H0YGN5 161 aa18.06■□□□□ 0.48
SSRP1-203ENST00000526696 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
SSRP1-203ENST00000526696 LRP10Q7Z4F1 713 aa18.06■□□□□ 0.48
SSRP1-203ENST00000526696 ARMC5Q96C12 935 aa18.06■□□□□ 0.48
SSRP1-203ENST00000526696 PER1O15534 1290 aaPredicted RBP18.05■□□□□ 0.48
SSRP1-203ENST00000526696 GPSM2P81274 684 aa18.05■□□□□ 0.48
SSRP1-203ENST00000526696 CAP1Q01518 475 aa18.05■□□□□ 0.48
SSRP1-203ENST00000526696 NSFL1CQ9UNZ2 370 aaKnown RBP18.05■□□□□ 0.48
SSRP1-203ENST00000526696 PTPN22Q9Y2R2 807 aa18.05■□□□□ 0.48
SSRP1-203ENST00000526696 LAMA3Q16787 3333 aa18.05■□□□□ 0.48
SSRP1-203ENST00000526696 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSRP1-203ENST00000526696 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
SSRP1-203ENST00000526696 PITPNM2Q9BZ72 1349 aa18.03■□□□□ 0.48
SSRP1-203ENST00000526696 PSME4Q14997 1843 aa18.03■□□□□ 0.48
SSRP1-203ENST00000526696 C6orf229H3BNL8 230 aa18.03■□□□□ 0.48
SSRP1-203ENST00000526696 CELF1Q92879 486 aaKnown RBP18.03■□□□□ 0.48
SSRP1-203ENST00000526696 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
SSRP1-203ENST00000526696 EIF4A1P60842 406 aaKnown RBP18.02■□□□□ 0.48
SSRP1-203ENST00000526696 PTPN12Q05209 780 aaKnown RBP18.02■□□□□ 0.48
SSRP1-203ENST00000526696 CHRDL2Q6WN34 429 aa18.02■□□□□ 0.48
SSRP1-203ENST00000526696 TMC4Q7Z404 712 aa18.02■□□□□ 0.48
SSRP1-203ENST00000526696 GMLQ99445 158 aa18.02■□□□□ 0.48
SSRP1-203ENST00000526696 ZNF609O15014 1411 aa18.01■□□□□ 0.47
SSRP1-203ENST00000526696 PDIA6Q15084 440 aa18.01■□□□□ 0.47
SSRP1-203ENST00000526696 NLRP10Q86W26 655 aa18.01■□□□□ 0.47
SSRP1-203ENST00000526696 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
SSRP1-203ENST00000526696 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
SSRP1-203ENST00000526696 TTLL12Q14166 644 aaPredicted RBP18■□□□□ 0.47
SSRP1-203ENST00000526696 TBC1D16Q8TBP0 767 aa18■□□□□ 0.47
SSRP1-203ENST00000526696 ZNF428Q96B54 188 aa18■□□□□ 0.47
SSRP1-203ENST00000526696 MYOZ2Q9NPC6 264 aa18■□□□□ 0.47
SSRP1-203ENST00000526696 PROSER3Q2NL68 480 aa17.99■□□□□ 0.47
SSRP1-203ENST00000526696 SPRYD7Q5W111 196 aa17.99■□□□□ 0.47
SSRP1-203ENST00000526696 RSBN1LQ6PCB5 846 aaPredicted RBP17.99■□□□□ 0.47
SSRP1-203ENST00000526696 AGBL3Q8NEM8 1001 aa17.99■□□□□ 0.47
SSRP1-203ENST00000526696 CD99L2Q8TCZ2 262 aa17.99■□□□□ 0.47
SSRP1-203ENST00000526696 ANXA1P04083 346 aa17.98■□□□□ 0.47
SSRP1-203ENST00000526696 NBPF9Q3BBW0 867 aa17.98■□□□□ 0.47
SSRP1-203ENST00000526696 ZNF333Q96JL9 665 aa17.98■□□□□ 0.47
SSRP1-203ENST00000526696 TRMT112Q9UI30 125 aaKnown RBP17.98■□□□□ 0.47
SSRP1-203ENST00000526696 DLG5Q8TDM6 1919 aa17.98■□□□□ 0.47
SSRP1-203ENST00000526696 SH3TC1Q8TE82 1336 aa17.98■□□□□ 0.47
SSRP1-203ENST00000526696 LAMB1P07942 1786 aa17.97■□□□□ 0.47
SSRP1-203ENST00000526696 IGF2BP3O00425 579 aaKnown RBP eCLIP17.97■□□□□ 0.47
SSRP1-203ENST00000526696 ALDH1A1P00352 501 aa17.97■□□□□ 0.47
SSRP1-203ENST00000526696 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
SSRP1-203ENST00000526696 EYA3Q99504 573 aa17.97■□□□□ 0.47
SSRP1-203ENST00000526696 ERBB4Q15303 1308 aa17.97■□□□□ 0.47
SSRP1-203ENST00000526696 USP17L8P0C7I0 530 aa17.96■□□□□ 0.47
SSRP1-203ENST00000526696 PRKG1Q13976 671 aa17.96■□□□□ 0.47
SSRP1-203ENST00000526696 LDLRAD1Q5T700 205 aa17.96■□□□□ 0.47
SSRP1-203ENST00000526696 TMEM106CQ9BVX2 250 aa17.96■□□□□ 0.47
SSRP1-203ENST00000526696 FZD1Q9UP38 647 aa17.96■□□□□ 0.47
SSRP1-203ENST00000526696 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
SSRP1-203ENST00000526696 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
SSRP1-203ENST00000526696 PRO3102Q9H379 93 aa17.95■□□□□ 0.46
SSRP1-203ENST00000526696 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
SSRP1-203ENST00000526696 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
SSRP1-203ENST00000526696 EFCC1Q9HA90 598 aa17.94■□□□□ 0.46
SSRP1-203ENST00000526696 TIMELESSQ9UNS1 1208 aa17.94■□□□□ 0.46
SSRP1-203ENST00000526696 ZNF646O15015 1829 aaPredicted RBP17.93■□□□□ 0.46
SSRP1-203ENST00000526696 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
SSRP1-203ENST00000526696 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
SSRP1-203ENST00000526696 MANSC4A6NHS7 340 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-203ENST00000526696 U2AF1L5P0DN76 240 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-203ENST00000526696 U2AF1Q01081 240 aaKnown RBP eCLIP17.92■□□□□ 0.46
SSRP1-203ENST00000526696 CRHR2Q13324 411 aa17.92■□□□□ 0.46
SSRP1-203ENST00000526696 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
SSRP1-203ENST00000526696 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
SSRP1-203ENST00000526696 UNC80Q8N2C7 3258 aa17.92■□□□□ 0.46
SSRP1-203ENST00000526696 WNT10BO00744 389 aa17.91■□□□□ 0.46
SSRP1-203ENST00000526696 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
SSRP1-203ENST00000526696 ARMC9Q7Z3E5 817 aa17.91■□□□□ 0.46
SSRP1-203ENST00000526696 SOX1O00570 391 aaPredicted RBP17.9■□□□□ 0.46
SSRP1-203ENST00000526696 UFL1O94874 794 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 NF2P35240 595 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 INHBEP58166 350 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 HSP90AB3PQ58FF7 597 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 COPS6Q7L5N1 327 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 CLMNQ96JQ2 1002 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 ANGEL1Q9UNK9 670 aaKnown RBP17.9■□□□□ 0.46
SSRP1-203ENST00000526696 PTCH2Q9Y6C5 1203 aa17.9■□□□□ 0.46
SSRP1-203ENST00000526696 WTIPA6NIX2 430 aaPredicted RBP17.89■□□□□ 0.45
SSRP1-203ENST00000526696 MYCP01106 439 aaPredicted RBP17.89■□□□□ 0.45
SSRP1-203ENST00000526696 EIF2S2P20042 333 aaKnown RBP17.89■□□□□ 0.45
SSRP1-203ENST00000526696 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
SSRP1-203ENST00000526696 SP3Q02447 781 aa17.89■□□□□ 0.45
SSRP1-203ENST00000526696 XAGE3Q8WTP9 111 aa17.89■□□□□ 0.45
SSRP1-203ENST00000526696 FAM89AQ96GI7 184 aa17.89■□□□□ 0.45
SSRP1-203ENST00000526696 WNK4Q96J92 1243 aa17.89■□□□□ 0.45
SSRP1-203ENST00000526696 G3V3G9 751 aa17.88■□□□□ 0.45
SSRP1-203ENST00000526696 AIMP1Q12904 312 aaKnown RBP17.88■□□□□ 0.45
SSRP1-203ENST00000526696 SLC4A8Q2Y0W8 1093 aa17.88■□□□□ 0.45
SSRP1-203ENST00000526696 DCAF8Q5TAQ9 597 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms