RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 NOS3P29474 1203 aa7.79□□□□□ -1.16
CSDE1-211ENST00000525970 MLLT1Q03111 559 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-211ENST00000525970 PLAURQ03405 335 aa7.79□□□□□ -1.16
CSDE1-211ENST00000525970 DCAF11Q8TEB1 546 aa7.79□□□□□ -1.16
CSDE1-211ENST00000525970 SMG9Q9H0W8 520 aaKnown RBP7.79□□□□□ -1.16
CSDE1-211ENST00000525970 SRA1Q9HD15 236 aaKnown RBP7.79□□□□□ -1.16
CSDE1-211ENST00000525970 XYLBO75191 536 aa7.78□□□□□ -1.16
CSDE1-211ENST00000525970 PSAPP07602 524 aa7.78□□□□□ -1.16
CSDE1-211ENST00000525970 EIF2AK2P19525 551 aaKnown RBP7.78□□□□□ -1.16
CSDE1-211ENST00000525970 SOX18P35713 384 aa7.78□□□□□ -1.16
CSDE1-211ENST00000525970 IREB2P48200 963 aaKnown RBP7.78□□□□□ -1.16
CSDE1-211ENST00000525970 LRFN2Q9ULH4 789 aa7.78□□□□□ -1.16
CSDE1-211ENST00000525970 DLL1O00548 723 aa7.77□□□□□ -1.17
CSDE1-211ENST00000525970 DEAF1O75398 565 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-211ENST00000525970 SLC51AQ86UW1 340 aa7.77□□□□□ -1.17
CSDE1-211ENST00000525970 TREML1Q86YW5 311 aa7.77□□□□□ -1.17
CSDE1-211ENST00000525970 MAP4K3Q8IVH8 894 aa7.77□□□□□ -1.17
CSDE1-211ENST00000525970 CACTIN-AS1Q8N1I8 211 aa7.77□□□□□ -1.17
CSDE1-211ENST00000525970 LOC102724428A0A0B4J2F2 783 aa7.76□□□□□ -1.17
CSDE1-211ENST00000525970 HYAL3O43820 417 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-211ENST00000525970 SIK1P57059 783 aa7.76□□□□□ -1.17
CSDE1-211ENST00000525970 CMTR1Q8N1G2 835 aaKnown RBP7.76□□□□□ -1.17
CSDE1-211ENST00000525970 TMEM130Q8N3G9 435 aa7.76□□□□□ -1.17
CSDE1-211ENST00000525970 CLP1Q92989 425 aaKnown RBP7.76□□□□□ -1.17
CSDE1-211ENST00000525970 PLD4Q96BZ4 506 aa7.76□□□□□ -1.17
CSDE1-211ENST00000525970 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
CSDE1-211ENST00000525970 RBSNQ9H1K0 784 aa7.76□□□□□ -1.17
CSDE1-211ENST00000525970 GHRHP01286 108 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 FKBP5Q13451 457 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-211ENST00000525970 OCLNQ16625 522 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 COX20Q5RI15 118 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 HFE2Q6ZVN8 426 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 RGL4Q8IZJ4 473 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-211ENST00000525970 MEGF10Q96KG7 1140 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 MRPL18Q9H0U6 180 aaKnown RBP7.75□□□□□ -1.17
CSDE1-211ENST00000525970 RNF112Q9ULX5 631 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 KCNMB2Q9Y691 235 aa7.75□□□□□ -1.17
CSDE1-211ENST00000525970 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-211ENST00000525970 MMP20O60882 483 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 ATP2B4P23634 1241 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 PRR23CQ6ZRP0 262 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 DZIP1LQ8IYY4 767 aaKnown RBP7.74□□□□□ -1.17
CSDE1-211ENST00000525970 MKNK1Q9BUB5 465 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 AKTIPQ9H8T0 292 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 CXXC1Q9P0U4 656 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-211ENST00000525970 GNEQ9Y223 722 aaKnown RBP7.74□□□□□ -1.17
CSDE1-211ENST00000525970 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 IVNS1ABPQ9Y6Y0 642 aa7.74□□□□□ -1.17
CSDE1-211ENST00000525970 COL26A1Q96A83 441 aa7.73□□□□□ -1.17
CSDE1-211ENST00000525970 MUC3BQ9H195 1237 aa7.73□□□□□ -1.17
CSDE1-211ENST00000525970 FAM13BQ9NYF5 915 aa7.73□□□□□ -1.17
CSDE1-211ENST00000525970 J3QW42 95 aa7.72□□□□□ -1.17
CSDE1-211ENST00000525970 BRD2P25440 801 aaKnown RBP7.72□□□□□ -1.17
CSDE1-211ENST00000525970 SND1Q7KZF4 910 aaKnown RBP eCLIP7.72□□□□□ -1.17
CSDE1-211ENST00000525970 NLRP13Q86W25 1043 aa7.72□□□□□ -1.17
CSDE1-211ENST00000525970 IL22RA1Q8N6P7 574 aa7.72□□□□□ -1.17
CSDE1-211ENST00000525970 ZNF428Q96B54 188 aa7.72□□□□□ -1.17
CSDE1-211ENST00000525970 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
CSDE1-211ENST00000525970 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
CSDE1-211ENST00000525970 F8W735 103 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-211ENST00000525970 NAA30Q147X3 362 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-211ENST00000525970 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-211ENST00000525970 C16orf46Q6P387 395 aa7.71□□□□□ -1.18
CSDE1-211ENST00000525970 ETFBKMTQ8IXQ9 262 aa7.71□□□□□ -1.18
CSDE1-211ENST00000525970 NSUN5Q96P11 429 aaKnown RBP7.71□□□□□ -1.18
CSDE1-211ENST00000525970 Q6ZS46 218 aa7.7□□□□□ -1.18
CSDE1-211ENST00000525970 PTCD1O75127 700 aaKnown RBP7.69□□□□□ -1.18
CSDE1-211ENST00000525970 SETDB1Q15047 1291 aa7.69□□□□□ -1.18
CSDE1-211ENST00000525970 PHLDB3Q6NSJ2 640 aa7.69□□□□□ -1.18
CSDE1-211ENST00000525970 CAPN12Q6ZSI9 719 aa7.69□□□□□ -1.18
CSDE1-211ENST00000525970 PIK3R5Q8WYR1 880 aa7.69□□□□□ -1.18
CSDE1-211ENST00000525970 AMOTL2Q9Y2J4 779 aa7.69□□□□□ -1.18
CSDE1-211ENST00000525970 SSFA2P28290 1259 aa7.68□□□□□ -1.18
CSDE1-211ENST00000525970 TRIP4Q15650 581 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-211ENST00000525970 CCDC27Q2M243 656 aa7.68□□□□□ -1.18
CSDE1-211ENST00000525970 TXNDC2Q86VQ3 553 aa7.68□□□□□ -1.18
CSDE1-211ENST00000525970 OR13H1Q8NG92 308 aa7.68□□□□□ -1.18
CSDE1-211ENST00000525970 SAP130Q9H0E3 1048 aa7.68□□□□□ -1.18
CSDE1-211ENST00000525970 PPME1Q9Y570 386 aa7.68□□□□□ -1.18
CSDE1-211ENST00000525970 FSTP19883 344 aa7.67□□□□□ -1.18
CSDE1-211ENST00000525970 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
CSDE1-211ENST00000525970 TRIM33Q9UPN9 1127 aa7.67□□□□□ -1.18
CSDE1-211ENST00000525970 FNDC3AQ9Y2H6 1198 aaKnown RBP7.67□□□□□ -1.18
CSDE1-211ENST00000525970 UBAP1LF5GYI3 381 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 GSC2O15499 205 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 ALX3O95076 343 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 SCNN1AP37088 669 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 RBM25P49756 843 aaKnown RBP7.66□□□□□ -1.18
CSDE1-211ENST00000525970 HYAL2Q12891 473 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 SPACA7Q96KW9 195 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 SEPT3Q9UH03 358 aa7.66□□□□□ -1.18
CSDE1-211ENST00000525970 TNFRSF10BO14763 440 aa7.65□□□□□ -1.18
CSDE1-211ENST00000525970 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.65□□□□□ -1.18
CSDE1-211ENST00000525970 SMNDC1O75940 238 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSDE1-211ENST00000525970 TTC39BQ5VTQ0 682 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-211ENST00000525970 KIF4AO95239 1232 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 GLB1P16278 677 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 CDC27P30260 824 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 ZAP70P43403 619 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms