RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TMEM130Q8N3G9 435 aa9.03□□□□□ -0.96
CSDE1-210ENST00000525878 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
CSDE1-210ENST00000525878 SRA1Q9HD15 236 aaKnown RBP9.03□□□□□ -0.96
CSDE1-210ENST00000525878 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.97
CSDE1-210ENST00000525878 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
CSDE1-210ENST00000525878 PIK3R5Q8WYR1 880 aa9.02□□□□□ -0.97
CSDE1-210ENST00000525878 MKNK1Q9BUB5 465 aa9.02□□□□□ -0.97
CSDE1-210ENST00000525878 ZFP64Q9NPA5 681 aa9.02□□□□□ -0.97
CSDE1-210ENST00000525878 FAM13BQ9NYF5 915 aa9.02□□□□□ -0.97
CSDE1-210ENST00000525878 SLAIN2Q9P270 581 aa9.02□□□□□ -0.97
CSDE1-210ENST00000525878 SETDB1Q15047 1291 aa9.01□□□□□ -0.97
CSDE1-210ENST00000525878 GDF6Q6KF10 455 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-210ENST00000525878 CACTIN-AS1Q8N1I8 211 aa9.01□□□□□ -0.97
CSDE1-210ENST00000525878 IL22RA1Q8N6P7 574 aa9.01□□□□□ -0.97
CSDE1-210ENST00000525878 RBSNQ9H1K0 784 aa9.01□□□□□ -0.97
CSDE1-210ENST00000525878 UBAP1LF5GYI3 381 aa9□□□□□ -0.97
CSDE1-210ENST00000525878 ZAP70P43403 619 aa9□□□□□ -0.97
CSDE1-210ENST00000525878 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
CSDE1-210ENST00000525878 COL13A1Q5TAT6 717 aaPredicted RBP9□□□□□ -0.97
CSDE1-210ENST00000525878 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
CSDE1-210ENST00000525878 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
CSDE1-210ENST00000525878 STIM2Q9P246 746 aa9□□□□□ -0.97
CSDE1-210ENST00000525878 TRIM33Q9UPN9 1127 aa9□□□□□ -0.97
CSDE1-210ENST00000525878 ZBTB39O15060 712 aa8.99□□□□□ -0.97
CSDE1-210ENST00000525878 LRP8Q14114 963 aa8.99□□□□□ -0.97
CSDE1-210ENST00000525878 AKTIPQ9H8T0 292 aa8.99□□□□□ -0.97
CSDE1-210ENST00000525878 F8W735 103 aaPredicted RBP8.98□□□□□ -0.97
CSDE1-210ENST00000525878 PRR23CQ6ZRP0 262 aa8.98□□□□□ -0.97
CSDE1-210ENST00000525878 Q6ZS46 218 aa8.98□□□□□ -0.97
CSDE1-210ENST00000525878 PBXIP1Q96AQ6 731 aa8.98□□□□□ -0.97
CSDE1-210ENST00000525878 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
CSDE1-210ENST00000525878 FNDC3AQ9Y2H6 1198 aaKnown RBP8.98□□□□□ -0.97
CSDE1-210ENST00000525878 TM4SF5O14894 197 aa8.97□□□□□ -0.97
CSDE1-210ENST00000525878 KIF4AO95239 1232 aa8.97□□□□□ -0.97
CSDE1-210ENST00000525878 PSMG3-AS1Q96PY0 264 aa8.97□□□□□ -0.97
CSDE1-210ENST00000525878 MUC3BQ9H195 1237 aa8.97□□□□□ -0.97
CSDE1-210ENST00000525878 ALX3O95076 343 aa8.96□□□□□ -0.98
CSDE1-210ENST00000525878 HYAL2Q12891 473 aa8.96□□□□□ -0.98
CSDE1-210ENST00000525878 ABTB2Q8N961 1025 aa8.96□□□□□ -0.98
CSDE1-210ENST00000525878 GPR152Q8TDT2 470 aa8.96□□□□□ -0.98
CSDE1-210ENST00000525878 DCAF11Q8TEB1 546 aa8.96□□□□□ -0.98
CSDE1-210ENST00000525878 PPME1Q9Y570 386 aa8.96□□□□□ -0.98
CSDE1-210ENST00000525878 HYAL3O43820 417 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-210ENST00000525878 RNF112Q9ULX5 631 aa8.95□□□□□ -0.98
CSDE1-210ENST00000525878 ATP11AP98196 1134 aa8.94□□□□□ -0.98
CSDE1-210ENST00000525878 TTC39BQ5VTQ0 682 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-210ENST00000525878 ADAMTSL4Q6UY14 1074 aa8.94□□□□□ -0.98
CSDE1-210ENST00000525878 GALNT11Q8NCW6 608 aa8.94□□□□□ -0.98
CSDE1-210ENST00000525878 ABI2Q9NYB9 513 aaPredicted RBP8.94□□□□□ -0.98
CSDE1-210ENST00000525878 ATP2B4P23634 1241 aa8.93□□□□□ -0.98
CSDE1-210ENST00000525878 PDE12Q6L8Q7 609 aaKnown RBP8.93□□□□□ -0.98
CSDE1-210ENST00000525878 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.93□□□□□ -0.98
CSDE1-210ENST00000525878 SLC51AQ86UW1 340 aa8.93□□□□□ -0.98
CSDE1-210ENST00000525878 SEPT3Q9UH03 358 aa8.93□□□□□ -0.98
CSDE1-210ENST00000525878 CYP2E1P05181 493 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-210ENST00000525878 CEP120Q8N960 986 aa8.92□□□□□ -0.98
CSDE1-210ENST00000525878 SPACA7Q96KW9 195 aa8.92□□□□□ -0.98
CSDE1-210ENST00000525878 RASSF4Q9H2L5 321 aa8.92□□□□□ -0.98
CSDE1-210ENST00000525878 SERPINA10Q9UK55 444 aa8.92□□□□□ -0.98
CSDE1-210ENST00000525878 SMNDC1O75940 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
CSDE1-210ENST00000525878 SCNN1AP37088 669 aa8.91□□□□□ -0.98
CSDE1-210ENST00000525878 CEP135Q66GS9 1140 aa8.91□□□□□ -0.98
CSDE1-210ENST00000525878 PBX4Q9BYU1 374 aa8.91□□□□□ -0.98
CSDE1-210ENST00000525878 TMEM63CQ9P1W3 806 aa8.91□□□□□ -0.98
CSDE1-210ENST00000525878 LINC01387J3KSC0 135 aa8.9□□□□□ -0.98
CSDE1-210ENST00000525878 CDC27P30260 824 aa8.9□□□□□ -0.98
CSDE1-210ENST00000525878 XKR5Q6UX68 686 aa8.9□□□□□ -0.98
CSDE1-210ENST00000525878 AGGF1Q8N302 714 aaeCLIP8.9□□□□□ -0.98
CSDE1-210ENST00000525878 NUDT16Q96DE0 195 aaKnown RBP8.9□□□□□ -0.98
CSDE1-210ENST00000525878 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-210ENST00000525878 KRTAP9-2Q9BYQ4 174 aa8.9□□□□□ -0.98
CSDE1-210ENST00000525878 LACRTQ9GZZ8 138 aa8.9□□□□□ -0.98
CSDE1-210ENST00000525878 ELP3Q9H9T3 547 aa8.9□□□□□ -0.98
CSDE1-210ENST00000525878 WISP1O95388 367 aa8.89□□□□□ -0.99
CSDE1-210ENST00000525878 NBPF11Q86T75 865 aa8.89□□□□□ -0.99
CSDE1-210ENST00000525878 ATCAYQ86WG3 371 aa8.89□□□□□ -0.99
CSDE1-210ENST00000525878 UBL7Q96S82 380 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-210ENST00000525878 ADAM19Q9H013 955 aa8.89□□□□□ -0.99
CSDE1-210ENST00000525878 KCNK4Q9NYG8 393 aa8.89□□□□□ -0.99
CSDE1-210ENST00000525878 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-210ENST00000525878 FSTP19883 344 aa8.88□□□□□ -0.99
CSDE1-210ENST00000525878 CD68P34810 354 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-210ENST00000525878 TXNDC11Q6PKC3 985 aa8.88□□□□□ -0.99
CSDE1-210ENST00000525878 HELQQ8TDG4 1101 aa8.88□□□□□ -0.99
CSDE1-210ENST00000525878 POP1Q99575 1024 aaKnown RBP8.88□□□□□ -0.99
CSDE1-210ENST00000525878 CNTN3Q9P232 1028 aa8.88□□□□□ -0.99
CSDE1-210ENST00000525878 SALL4Q9UJQ4 1053 aa8.88□□□□□ -0.99
CSDE1-210ENST00000525878 FSCN2O14926 492 aa8.87□□□□□ -0.99
CSDE1-210ENST00000525878 RPLP1P05386 114 aaKnown RBP8.87□□□□□ -0.99
CSDE1-210ENST00000525878 EPHA1P21709 976 aa8.87□□□□□ -0.99
CSDE1-210ENST00000525878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-210ENST00000525878 NFKBIEO00221 500 aa8.86□□□□□ -0.99
CSDE1-210ENST00000525878 GLB1P16278 677 aa8.86□□□□□ -0.99
CSDE1-210ENST00000525878 ZNF438Q7Z4V0 828 aa8.86□□□□□ -0.99
CSDE1-210ENST00000525878 NCAPG2Q86XI2 1143 aa8.86□□□□□ -0.99
CSDE1-210ENST00000525878 KLHL23Q8NBE8 558 aa8.86□□□□□ -0.99
CSDE1-210ENST00000525878 SH2B1Q9NRF2 756 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-210ENST00000525878 PTPRAP18433 802 aa8.85□□□□□ -0.99
CSDE1-210ENST00000525878 KIAA1211Q6ZU35 1233 aa8.85□□□□□ -0.99
CSDE1-210ENST00000525878 ARMC10Q8N2F6 343 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms