RNA–Protein interactions for RNA: ENST00000525485.5

NCAPD3-202, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 4

Gene NCAPD3, Length 555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-202ENST00000525485 LINS1Q8NG48 757 aa28.44■■■□□ 2.14
NCAPD3-202ENST00000525485 PLA2G12BQ9BX93 195 aa28.44■■■□□ 2.14
NCAPD3-202ENST00000525485 ANKIB1Q9P2G1 1089 aa28.44■■■□□ 2.14
NCAPD3-202ENST00000525485 GGA1Q9UJY5 639 aa28.44■■■□□ 2.14
NCAPD3-202ENST00000525485 ZNF521Q96K83 1311 aa28.43■■■□□ 2.14
NCAPD3-202ENST00000525485 UFL1O94874 794 aa28.43■■■□□ 2.14
NCAPD3-202ENST00000525485 ZC3H12CQ9C0D7 883 aaKnown RBP28.43■■■□□ 2.14
NCAPD3-202ENST00000525485 MKRN1Q9UHC7 482 aaKnown RBP28.43■■■□□ 2.14
NCAPD3-202ENST00000525485 XDHP47989 1333 aa28.43■■■□□ 2.14
NCAPD3-202ENST00000525485 ECE2O60344 883 aa28.42■■■□□ 2.14
NCAPD3-202ENST00000525485 DPF2Q92785 391 aa28.42■■■□□ 2.14
NCAPD3-202ENST00000525485 GREM2Q9H772 168 aa28.41■■■□□ 2.14
NCAPD3-202ENST00000525485 PGAP2Q9UHJ9 254 aa28.41■■■□□ 2.14
NCAPD3-202ENST00000525485 PSMD14O00487 310 aa28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 CASP7P55210 303 aa28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 ZC3H15Q8WU90 426 aaKnown RBP28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 GPR101Q96P66 508 aaPredicted RBP28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 BSDC1Q9NW68 430 aaPredicted RBP28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 CNOT7Q9UIV1 285 aaKnown RBP28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 TRPM7Q96QT4 1865 aa28.4■■■□□ 2.14
NCAPD3-202ENST00000525485 RPS12P25398 132 aaKnown RBP28.39■■■□□ 2.14
NCAPD3-202ENST00000525485 DOK7Q18PE1 504 aa28.39■■■□□ 2.14
NCAPD3-202ENST00000525485 SCN9AQ15858 1988 aa28.39■■■□□ 2.13
NCAPD3-202ENST00000525485 H7C1D1 291 aa28.38■■■□□ 2.13
NCAPD3-202ENST00000525485 IFFO2Q5TF58 517 aa28.38■■■□□ 2.13
NCAPD3-202ENST00000525485 RASSF10A6NK89 507 aa28.37■■■□□ 2.13
NCAPD3-202ENST00000525485 ATP2B4P23634 1241 aa28.37■■■□□ 2.13
NCAPD3-202ENST00000525485 MICALL2Q8IY33 904 aa28.37■■■□□ 2.13
NCAPD3-202ENST00000525485 ZBTB12Q9Y330 459 aaPredicted RBP28.37■■■□□ 2.13
NCAPD3-202ENST00000525485 SPEF2Q9C093 1822 aa28.36■■■□□ 2.13
NCAPD3-202ENST00000525485 TRPM4Q8TD43 1214 aa28.36■■■□□ 2.13
NCAPD3-202ENST00000525485 CSF1RP07333 972 aa28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 HSPA1AP0DMV8 641 aaKnown RBP28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 HSPA1BP0DMV9 641 aaKnown RBP28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 HIRAP54198 1017 aaPredicted RBP28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 BEND3Q5T5X7 828 aa28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 KCNQ5Q9NR82 932 aa28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 MINPP1Q9UNW1 487 aa28.35■■■□□ 2.13
NCAPD3-202ENST00000525485 PSME4Q14997 1843 aa28.34■■■□□ 2.13
NCAPD3-202ENST00000525485 G3V3G9 751 aa28.34■■■□□ 2.13
NCAPD3-202ENST00000525485 VIL1P09327 827 aaKnown RBP28.34■■■□□ 2.13
NCAPD3-202ENST00000525485 DCAF8Q5TAQ9 597 aa28.34■■■□□ 2.13
NCAPD3-202ENST00000525485 ZNF609O15014 1411 aa28.34■■■□□ 2.13
NCAPD3-202ENST00000525485 SHTN1A0MZ66 631 aa28.33■■■□□ 2.13
NCAPD3-202ENST00000525485 F6X3S4 739 aa28.33■■■□□ 2.13
NCAPD3-202ENST00000525485 IGHMBP2P38935 993 aaKnown RBP28.33■■■□□ 2.13
NCAPD3-202ENST00000525485 VEGFBP49765 207 aa28.33■■■□□ 2.13
NCAPD3-202ENST00000525485 TRAF5O00463 557 aa28.32■■■□□ 2.12
NCAPD3-202ENST00000525485 ITGA6P23229 1130 aa28.32■■■□□ 2.12
NCAPD3-202ENST00000525485 FMR1Q06787 632 aaKnown RBP eCLIP28.32■■■□□ 2.125e-7■□□□□ 11.2
NCAPD3-202ENST00000525485 DEFB115Q30KQ5 88 aa28.32■■■□□ 2.12
NCAPD3-202ENST00000525485 MED23Q9ULK4 1368 aa28.32■■■□□ 2.12
NCAPD3-202ENST00000525485 FAM161AQ3B820 660 aa28.31■■■□□ 2.12
NCAPD3-202ENST00000525485 CST9Q5W186 159 aa28.31■■■□□ 2.12
NCAPD3-202ENST00000525485 ABT1Q9ULW3 272 aaKnown RBP28.31■■■□□ 2.12
NCAPD3-202ENST00000525485 PODNQ7Z5L7 613 aa28.3■■■□□ 2.12
NCAPD3-202ENST00000525485 E9PSI1 815 aa28.29■■■□□ 2.12
NCAPD3-202ENST00000525485 CCT4P50991 539 aaKnown RBP28.29■■■□□ 2.12
NCAPD3-202ENST00000525485 CDC37L1Q7L3B6 337 aa28.29■■■□□ 2.12
NCAPD3-202ENST00000525485 SAMD7Q7Z3H4 446 aa28.29■■■□□ 2.12
NCAPD3-202ENST00000525485 GLIS2Q9BZE0 524 aaPredicted RBP28.29■■■□□ 2.12
NCAPD3-202ENST00000525485 LEMD3Q9Y2U8 911 aa28.29■■■□□ 2.12
NCAPD3-202ENST00000525485 AGBL3Q8NEM8 1001 aa28.28■■■□□ 2.12
NCAPD3-202ENST00000525485 MPHOSPH8Q99549 860 aa28.28■■■□□ 2.12
NCAPD3-202ENST00000525485 ANKRD2Q9GZV1 360 aa28.28■■■□□ 2.12
NCAPD3-202ENST00000525485 ALDH1L1O75891 902 aa28.27■■■□□ 2.12
NCAPD3-202ENST00000525485 RSBN1LQ6PCB5 846 aaPredicted RBP28.27■■■□□ 2.12
NCAPD3-202ENST00000525485 ANKRD18BA2A2Z9 1011 aa28.26■■■□□ 2.11
NCAPD3-202ENST00000525485 GRM8O00222 908 aa28.26■■■□□ 2.11
NCAPD3-202ENST00000525485 FOXO4P98177 505 aa28.26■■■□□ 2.11
NCAPD3-202ENST00000525485 TBC1D10BQ4KMP7 808 aaPredicted RBP28.26■■■□□ 2.11
NCAPD3-202ENST00000525485 TLL2Q9Y6L7 1015 aa28.26■■■□□ 2.11
NCAPD3-202ENST00000525485 WTIPA6NIX2 430 aaPredicted RBP28.25■■■□□ 2.11
NCAPD3-202ENST00000525485 EGFRP00533 1210 aa28.25■■■□□ 2.11
NCAPD3-202ENST00000525485 COL13A1Q5TAT6 717 aaPredicted RBP28.25■■■□□ 2.11
NCAPD3-202ENST00000525485 POLR2AP24928 1970 aaKnown RBP28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 WDR33Q9C0J8 1336 aaKnown RBP28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 USP17L3A6NCW0 530 aa28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 USP17L4A6NCW7 530 aa28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 CELF2O95319 508 aaKnown RBP28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 ZNF280AP59817 542 aaPredicted RBP28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 USP17L1Q7RTZ2 530 aa28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 GMLQ99445 158 aa28.24■■■□□ 2.11
NCAPD3-202ENST00000525485 SLFN5Q08AF3 891 aa28.23■■■□□ 2.11
NCAPD3-202ENST00000525485 IFIT5Q13325 482 aaKnown RBP28.23■■■□□ 2.11
NCAPD3-202ENST00000525485 KIF4BQ2VIQ3 1234 aa28.23■■■□□ 2.11
NCAPD3-202ENST00000525485 SRCIN1Q9C0H9 1055 aa28.23■■■□□ 2.11
NCAPD3-202ENST00000525485 COA1Q9GZY4 146 aa28.23■■■□□ 2.11
NCAPD3-202ENST00000525485 ZNF804BA4D1E1 1349 aa28.22■■■□□ 2.11
NCAPD3-202ENST00000525485 THSD7BQ9C0I4 1608 aa28.22■■■□□ 2.11
NCAPD3-202ENST00000525485 CCER2I3L3R5 266 aa28.22■■■□□ 2.11
NCAPD3-202ENST00000525485 ECE1P42892 770 aa28.22■■■□□ 2.11
NCAPD3-202ENST00000525485 C9orf78Q9NZ63 289 aaPredicted RBP28.22■■■□□ 2.11
NCAPD3-202ENST00000525485 CHRNDQ07001 517 aa28.21■■■□□ 2.11
NCAPD3-202ENST00000525485 RBM26Q5T8P6 1007 aaKnown RBP28.21■■■□□ 2.11
NCAPD3-202ENST00000525485 SLC4A10Q6U841 1118 aa28.21■■■□□ 2.11
NCAPD3-202ENST00000525485 SAPCD2Q86UD0 394 aa28.21■■■□□ 2.11
NCAPD3-202ENST00000525485 MRPL50Q8N5N7 158 aaKnown RBP28.21■■■□□ 2.11
NCAPD3-202ENST00000525485 HHIPL1Q96JK4 782 aa28.21■■■□□ 2.11
NCAPD3-202ENST00000525485 WBP1LQ9NX94 342 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms