RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
CLNS1A-204ENST00000525428 H3BQF6 201 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 G2E3Q7L622 706 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 SCAND2PQ9GZW5 306 aaPredicted RBP13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 ELP1O95163 1332 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 BRD2P25440 801 aaKnown RBP13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 IL13P35225 146 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 MCM6Q14566 821 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
CLNS1A-204ENST00000525428 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 SGSM2O43147 1006 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 GNAI2P04899 355 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 USHBP1Q8N6Y0 703 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 ARFGAP3Q9NP61 516 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 CLGNO14967 610 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 TSGA10IPQ3SY00 556 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 SULT6B1Q6IMI4 303 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 TPCN1Q9ULQ1 816 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
CLNS1A-204ENST00000525428 PHACTR2O75167 634 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 PTPN21Q16825 1174 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 TTC21AQ8NDW8 1320 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 TADA3O75528 432 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 ETF1P62495 437 aaKnown RBP13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 MCM10Q7L590 875 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 BRMS1Q9HCU9 246 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 FANCGO15287 622 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 MAGEA9P43362 315 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 PTH1RQ03431 593 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 TTLL5Q6EMB2 1281 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
CLNS1A-204ENST00000525428 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 EXOC4Q96A65 974 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 FTOQ9C0B1 505 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 OVOS2A0A0J9YW53 1432 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 OVOS2Q6IE36 1432 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 AATKQ6ZMQ8 1374 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 GSDMDP57764 484 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 GOLGA8FQ08AF8 430 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 GOLGA8DPQ0D2H9 430 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 STX1AQ16623 288 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 PARD6BQ9BYG5 372 aa13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
CLNS1A-204ENST00000525428 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 FMN2Q9NZ56 1722 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 N4BP1O75113 896 aaKnown RBP13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 GCP02774 474 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 FUT8Q9BYC5 575 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 MST1RQ04912 1400 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
CLNS1A-204ENST00000525428 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.31
CLNS1A-204ENST00000525428 PPFIA3O75145 1194 aa13.08□□□□□ -0.31
CLNS1A-204ENST00000525428 CHRNA2Q15822 529 aa13.08□□□□□ -0.31
CLNS1A-204ENST00000525428 WWC2Q6AWC2 1192 aa13.08□□□□□ -0.31
CLNS1A-204ENST00000525428 SH2B1Q9NRF2 756 aaPredicted RBP13.08□□□□□ -0.31
CLNS1A-204ENST00000525428 TOPAZ1Q8N9V7 1692 aa13.08□□□□□ -0.32
CLNS1A-204ENST00000525428 RAB11FIP3O75154 756 aa13.08□□□□□ -0.32
CLNS1A-204ENST00000525428 LRRC59Q96AG4 307 aaKnown RBP13.08□□□□□ -0.32
CLNS1A-204ENST00000525428 VPS53Q5VIR6 699 aa13.08□□□□□ -0.32
CLNS1A-204ENST00000525428 ZSCAN31Q96LW9 406 aaPredicted RBP13.08□□□□□ -0.32
CLNS1A-204ENST00000525428 UTP14AQ9BVJ6 771 aaKnown RBP13.08□□□□□ -0.32
CLNS1A-204ENST00000525428 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 KIF20BQ96Q89 1820 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 BIN1O00499 593 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 NRDCO43847 1150 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 CCDC172P0C7W6 258 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 LONRF2Q1L5Z9 754 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 LRRFIP1Q32MZ4 808 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 DNAJC21Q5F1R6 531 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 CCAR1Q8IX12 1150 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms